Solanum stenotomum: 125843817
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Entry
125843817 CDS
T08385
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BIG BROTHER-like
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125843817
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125843817
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125843817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf_RING_Vps8
zf-C3H2C3
zf-RING_UBOX
zf-RING_Vps41
Prok-RING_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
125843817
NCBI-ProteinID:
XP_049378983
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All DBs
Position
1:complement(21580299..21586422)
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AA seq
358 aa
AA seq
DB search
MRRSNDAYIDVDGVSLNPGISASGPVCAREXTDKDRDRDKQKREREGDCIYMYLSIYSLS
IQKSSTYMPTKSTFHFSTTIWSLLCCSLTHQHITTLSVSLFFWYFFVVLLKSVKKMSGDQ
HMEEMHYMNMGFPYNVPESFPGFLDGVSQAPIIQYHNNPVQIQENAYWSMNMSYYKYEHS
NLESTSYHSYENGNNHVSRPDFSERPWEYAVPMNVHEGVSTDVIYEENTAPVEDAGTEEC
VLSNQDDSNHQDILEDEIDPDNMTYEELLDLGETVGTESRGLPEELINLLPTTKYKSNGI
FSRKKSEERCVICQMRYKRGDRQINFPCKHIYHTECGSKWLSINKTCPICNTEVLLDE
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagacggagtaacgatgcatacatagatgtagatggcgtgtctctcaatcccggcata
agcgccagtggccctgtgtgtgcaagagagnagactgacaaagacagagacagagacaaa
caaaagagagaaagagaaggggactgtatctatatgtatctatctatatactctctttct
atacaaaaaagcagcacatatatgccaacaaaatccactttccatttttccactacaatt
tggtcactcctctgctgctcccttacccatcaacacattactactctctctgtttcttta
tttttctggtatttttttgtagttcttttaaaatcagtgaagaaaatgagtggggatcaa
cacatggaggagatgcattatatgaacatgggatttccttataatgttccagagagtttc
ccaggcttcttggatggtgtttcacaagcccctataatacagtatcataataaccctgta
cagattcaggaaaatgcatattggtctatgaatatgagttattataaatatgagcactcc
aatcttgagagtacttcgtatcattcttatgagaatggcaacaaccatgtatcaagaccg
gatttctcagagagaccttgggagtatgctgtacctatgaatgttcacgaaggtgtatcg
actgatgtaatatacgaggaaaatactgcccccgtggaggatgctggcacggaggaatgt
gttctatctaatcaagatgattctaaccaccaggatattttggaagatgaaattgaccct
gacaacatgacctatgaggagttacttgatttaggtgaaacagttggaactgaaagtcga
ggacttcccgaggaactaattaatttgcttccaacaaccaaatacaagtctaatggaatc
ttttctaggaaaaaatccgaagaaagatgtgtcatctgtcaaatgaggtataagcgaggg
gatcgacaaataaacttcccatgcaagcacatataccacactgaatgtggctccaaatgg
ctgagcatcaacaagacatgtcccatttgcaatacagaggtactcctcgacgaatga
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