Solanum stenotomum: 125843869
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Entry
125843869 CDS
T08385
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125843869
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125843869
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
125843869
NCBI-ProteinID:
XP_049379049
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Position
11:54444445..54452073
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AA seq
680 aa
AA seq
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MKKEWSFVLGLLGILLQLFLLAESSLTKQNVLKKNSQQDQQAFPPVQILRLDDDYVVVDN
GIFNITFSVPGGMVTGIQYNGIDNLLENGNKDDNRGYWDIVWNKPDEKGIFDKLHATDFK
VIMEDENQVELSFTRTWDSLNSKQLSMNIDKRFIILRGISGFYCYGILERLEGWPDIDVY
QGRIVFKLKEKLFQYMAISDERQRIMPTAHDREVGQKLDYSEAVLLTNPNNSFIKGEVDD
KYQYSCENKDNRVHGWISPTPRTGFWMITPTDEFRTGGPVKQDLTSHTGPVNLNMFFSTH
YAGEVLGLKFRNGEPWKKVFGPVFVYMNSLSPDEPDTLTLWTDAKEQMFVETENWPYNFP
LLEDYARADQRGIVSGRLLVRDRYVSQSLMIANSAFIGLAAPGNVGSWQLENKAYQFWTQ
TDSEGYFLIKNVIPGNYSLYAWVPGFVGDYMYDPYIIVTPGSRKRVETLIYDAPRNGPTL
WEIGIPDRTAAEFFIPDAQPKLLNQLYVVHNQERYRQYGLWDRYTEIYPDDDLVFTIGLS
NYQTDWFFAHLNRYFYNDDGNKTYAPTTWQVLFDLEDVDQSSNYTLQLALASAHEAELQV
RFNDPEIDAPHYSTGLIGKDNAIARHGIHGIYRLYTINVPGSLLGFGTNIMYLKQSRGDR
PFRGLMYDYIRLEGPSDESD
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaatggagctttgttcttggattattgggaattttgcttcaactatttttg
ctggctgaatcttcattaacaaaacagaatgtattaaagaaaaatagtcaacaagaccag
caagcttttccaccagtgcaaattctaagactggatgatgattatgttgtggtggataat
ggaatatttaatattactttttctgttcctggtggaatggtcactggaatacaatataat
ggaattgataatttattggaaaatggaaataaagatgataacagagggtattgggatatt
gtttggaacaaaccagatgaaaaagggatttttgacaaacttcatgcaacagattttaag
gttattatggaagatgaaaatcaagtggagctttcattcacaaggacttgggattcttta
aattccaaacaactttccatgaatattgacaaaaggtttataatattaagaggaatttct
ggattttattgttatggaattttggaacgtttagaaggatggccagatattgatgtttac
caaggaagaattgtcttcaagctcaaggaaaaattgttccaatatatggcaatttcagat
gaaagacaaaggattatgccaacggcccatgatcgtgaagtgggccaaaaacttgattat
agtgaagctgttcttcttacaaacccaaacaattctttcatcaaaggagaggttgatgac
aaatatcaatattcttgtgaaaacaaggataaccgggtccatggatggatcagcccgact
ccacgaaccgggttttggatgattacaccaaccgatgagttcagaactggtgggcccgtc
aaacaagaccttacttctcataccggcccagtaaatctaaatatgttctttagtacacat
tatgctggagaagtattgggactaaaatttagaaatggagagccctggaaaaaagttttt
ggccctgtttttgtctacatgaactcactttcacctgatgagccagacactctcacactt
tggaccgatgcaaaagaacaaatgttcgttgagactgaaaattggccgtataatttccct
cttttggaggattatgctcgagctgatcaacgtggtattgtaagtggcagattgctcgtt
cgagatagatatgttagccaaagtcttatgattgcaaattcagcttttattggactggct
gctcctggaaatgttggatcttggcaattagaaaataaggcttatcaattttggactcaa
actgatagtgagggatatttcttgatcaagaatgttattcctgggaactatagtttatat
gcttgggtgcctggatttgttggagattacatgtacgatccgtacattattgtcacccca
ggatcaagaaaaagggtagaaactcttatatatgatgctccaagaaatggtccaacattg
tgggaaattggaattcctgatagaacagctgctgaattcttcatccctgatgcacaacca
aaactcttgaaccaattatatgttgtacataatcaagaaaggtataggcaatatggatta
tgggataggtatacagagatataccctgatgatgatttggtgtttactattggattaagt
aactatcaaacagattggttctttgctcatctcaatagatatttttacaatgatgatggg
aacaagacttatgcaccaacaacatggcaagttctatttgatcttgaagatgttgatcag
tcatcaaactatactcttcaactagcattggcctcagcacatgaagctgaattgcaagtt
cgattcaatgatccagaaatcgatgctcctcactattcgacagggttgatagggaaggat
aacgcgatagcaagacatggtatacatggaatatacagactatatactataaatgttcct
ggctctctccttggttttggaacaaatattatgtatctcaagcaaagtagaggtgatagg
ccttttagaggacttatgtatgattatattcgtctcgaaggtccttcagatgaaagcgat
tag
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