Solanum stenotomum: 125843883
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Entry
125843883 CDS
T08385
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00900
Terpenoid backbone biosynthesis
sstn01100
Metabolic pathways
sstn01110
Biosynthesis of secondary metabolites
Module
sstn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125843883
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sstn01006
]
125843883
Enzymes [BR:
sstn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125843883
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125843883
2.5.1.29 geranylgeranyl diphosphate synthase
125843883
Prenyltransferases [BR:
sstn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125843883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
EcsC
Motif
Other DBs
NCBI-GeneID:
125843883
NCBI-ProteinID:
XP_049379064
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All DBs
Position
11:54385432..54386726
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AA seq
365 aa
AA seq
DB search
MAFLATISGLDNLFLSNTLNNNFAFSRKLPPSQSYSFLHKKIQASNVANSFRAFQVKEQE
VSSKAEKFILPKFEFQEYMVMKALKVNKALDEAIPMQEPIKVHEAMRYSLLAGGKRVRPI
LCMASCEVVGGDESLAIPAACAVEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKVFGENTA
VLVGDALLSLAFEHVATKTQNVTPQRVVQAIGELGSAVGSEGLVAGQIVDLASEGKQVSL
TELEYIHHHKTARLLEAAVVCGAIMGGGNEVDVERMRSYARCIGLLFQVVDDILDVTKSS
DELGKTAGKDLITDKATYPKLMGLEKARQYASELMAKAMNELSYFDSAKAAPLYHIASYI
ANRQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcatttttagctaccatttctggccttgacaatctgttcctttccaataccctaaac
aataactttgctttcagtagaaagctcccacctagccagtcttacagtttccttcacaag
aaaatccaggctagcaatgtcgcgaactcattccgagcttttcaagtcaaggaacaagaa
gtttcatccaaggcagagaaattcatcttgcctaagtttgagtttcaagaatacatggta
atgaaggcactcaaggtaaacaaagcactagatgaagcaataccaatgcaagagcctata
aaagttcatgaagccatgaggtactcacttctagctggaggaaaacgtgtccggccgatc
ctctgcatggcttcttgtgaagttgtaggaggggatgaatccttagctatacctgcagct
tgtgcggttgagatgatccataccatgtcactcgtccatgatgatcttccttgcatggac
aatgatgatctacgtcgtggcaagcccacaaaccataaggtttttggggaaaacactgca
gttcttgtaggggatgcacttttgtctttggcctttgaacatgtggctaccaagactcag
aatgtgacaccccaaagagtggttcaagccattggggaattgggttcagccgttggctca
gaagggctcgtggcagggcagattgtggacttggcgagtgagggaaaacaagttagccta
actgaactggagtacattcaccaccataagacggcgaggcttttggaggctgctgtggtt
tgtggggcaataatggggggaggaaatgaggttgatgtggagagaatgaggagctatgct
aggtgcattggactgttgtttcaagtggtagatgatattcttgatgttactaagtcatca
gatgagttgggaaagacagctggtaaggacctaataacagataaggctacatatcctaag
ttgatggggctagaaaaggctcggcaatatgccagtgagctgatggctaaggccatgaat
gagctaagctactttgattctgcaaaggcagcacctctttatcatattgctagttatatt
gcaaatcgacagaattga
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