Solanum stenotomum: 125843952
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Entry
125843952 CDS
T08385
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125843952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125843952
Spliceosome [BR:
sstn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125843952
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
125843952
NCBI-ProteinID:
XP_049379116
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All DBs
Position
1:complement(99231236..99232793)
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AA seq
460 aa
AA seq
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MTTLDSFMADLEELDELSDNTHDVHGKAFNYDLDNVSMLQKSRKYVDIMQKVEDAIVSAN
KGDVIVEEDDHEYKLIVDCNALSVEIEDEIAIIHNFIRDKYRLKFPELDSLVNHPIDYAR
VVKKIGSETDLTLVDLQELLPSAIIMVVSVTASTTSGKPLPEDVLQRTLEACDRTLALDS
SKKKVVDFVESRMNDIAPNLSGVVGSAVAAKLMCSAGGLSLLANMPADNVRNLGGKRKNL
AGFSTASASRFCYVEETDIFQSTPPSLRVKVCRMLANKAILAARMDLNKAGIFNFKEEIC
KTIEKLQELPPARLPKPLPVPDFRSKKQRGGIRHSKRKDRYQVTDAQKLRNRVKFGVPEE
SSLGDGLGVGYGMLGQTGSGKLRVSPRQNKKIAKISKVKSYGSSRAAAISGLMSSSFAFT
PVQGIELSNPQAYSDGTQSTYFSETGTFSKIKRQKSLFGV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcttgattcgttcatggcagatttggaggaattagacgaattgtccgataat
acgcatgatgttcatggaaaggcgttcaattacgatctagataatgtttcgatgctgcaa
aagtcacgtaaatacgttgatataatgcagaaagttgaagatgctatagtttcagcgaat
aaaggtgatgttattgttgaagaagatgatcacgaatataagttgatagtagattgtaac
gcattatctgttgaaattgaggatgaaattgctataatccacaattttattcgtgataag
tatcggttgaagtttcctgagttagattcacttgttaatcatccaattgattatgctagg
gttgttaaaaaaattgggagcgaaacggatctgactcttgttgatttgcaggaattgtta
ccttcagctattatcatggttgtttctgttacggcgtcaactactagtggcaagccgttg
ccggaggatgttttacagaggacattggaagcatgtgatagaaccctagctcttgattcg
tcgaagaagaaggtggttgattttgttgagagtcgaatgaatgatattgctcctaatctg
tctggtgttgtgggtagtgcagttgctgcgaaacttatgtgttctgctggtggtttatcg
ttgttggcgaatatgcctgctgataatgtgaggaatctgggtggtaaaaggaagaattta
gcagggttttccacagctagtgcttcgcggttttgttatgttgaggaaacagatatattt
cagagtacacctccttcgttaagggtgaaagtttgtagaatgctggcgaataaagctatt
ctagcagcacgtatggacttgaacaaagcaggaatattcaattttaaggaagagatttgt
aaaacgatagagaaattgcaagagctacctcctgcaaggctgccaaagcctcttccagtt
cctgattttaggtctaagaagcagagaggtggtattcggcatagtaagaggaaagataga
tatcaggttacagacgcgcagaagctgaggaatagggtgaagttcggggtacctgaagaa
agctcgttaggggatggattaggggtgggctatggtatgcttggtcagactggaagtggc
aagttgcgtgtatcacctcgtcagaacaagaaaatagcgaagatttccaaggtgaagagt
tatggaagcagtcgtgcagcagccatatcaggcctgatgagttcgagttttgccttcaca
ccagtacaagggattgagctatcgaatcctcaggcatattcagacggaactcaaagcacc
tatttttctgagacaggaacattttcgaagattaagagacaaaagtccctttttggtgtt
tga
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