Solanum stenotomum: 125843991
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Entry
125843991 CDS
T08385
Name
(RefSeq) pleiotropic drug resistance protein 2-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125843991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125843991
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125843991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
SMC_N
AAA_30
AAA_23
AAA
AAA_22
AAA_33
AAA_18
Rad17
AAA_28
AAA_25
RsgA_GTPase
nSTAND3
TsaE
NACHT
AAA_5
AAA_7
cobW
AAA_15
NTPase_1
Ploopntkinase3
AAA_19
SRP54
ABC_ATPase
DO-GTPase2
T2SSE
AAA_17
Zeta_toxin
AAA_11
RuvB_N
Mg_chelatase
ATP_bind_1
PDR_CDR
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
125843991
NCBI-ProteinID:
XP_049379163
LinkDB
All DBs
Position
11:50702405..50719163
Genome browser
AA seq
1468 aa
AA seq
DB search
MEITLGQDELAKSMSRRSMSKSIRSVSSRSWASASVREVMFTAPGGGDVFQKSTRENDDE
QELKWAAIERLPTYDRLRKGILRQTLDDGKINYHEVDVVHLGLQDRKQILESILKVVEED
NERFLRRLRGRTDRVGIEIPKIEVRFEDLCIDGDAYVGSRALPTLWNASINFVEGFLEKI
KIVPSKKRVVNILRDVNGIVRPSRMTLLLGPPGSGKTTLLKALAAVLDKDLRVNGRISYC
GQELSEFIPQRTCAYISQHDVHHGEMTVRETLDFAGRCLGVGTRYELLTELSRREKDAGI
KPDPEIDAFMKATAVAGQESSLVTDYALKILGMDICADILVGDDMRRGISGGQKKRLTTG
EMLVGPAKVFFMDEISTGLDSSTTFQIVKYMRQMVHIMDVTMIISLLQPAPETYDLFDDI
ILLSEGKIIYQGPRENVLEFFESVGFKCPERKGVADFLQEVTSLKDQEQYWFRRNEPYQY
ISVAEFAERFRNFHVGQQLLDDLRVPYDKNKAHPAALVTEKYGISNMELLKACLSREWLL
IKRNSFLYIFKTFQITVMSIIAFTVFFRTEMKTGQLADGGKFFGALFFSLINIMFNGTAE
LALTIFRLPVFFKQRDSLFYPAWAFALPIWLLRIPISFIESLIWVLLTYYTIGFAPDFTR
FLRQFLVFFALHQSALSLFRFVAALGRSQVVATTFATFTILIVFVLGGFIVAKDDLEPWM
RWGYYISPMTYGQNAIAINEFLDERWNTPNNDTRFSEPTVGKVLLKARSMYTSDYVFWLC
VVALFAFSFLFNICFIFALTYLNPFGDSRSVNSDDGKSKKTKQTEWTSASSAPLTEGIVM
DVRNTNNSSIEEAKKRGMVLPFQPLSLAFNHINYYVDMPSEMKAQGVDETRLQLLRDVSG
AFRPGVLTALVGVSGAGKTTLMDVLAGRKTEGYTEGSINISGYPKNQSTFARISGYCEQN
DIHSPHVTVYESLVYSAWLRLSPDVKEYTRKNFVEEIMELVELNPLRDSLVGLPGVDGLS
TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI
DIFEAFDELLLMKRGGQVIYAGPLGHHSHLLIEYFQSIPGVPGIKEGYNPATWMLDISSL
AVEAQLQVDFADIYANSELYRRNQELIKELSIPAPGFKDLHFPTEFSQPFFEQCKACFWK
QHLSYWRHPQYNAFRFAMTTMIGVMFGIIFWNKGNQLSKLQDLLNIVGAMYAAVMFLGGT
NTSAVQSIVAVERTVFYREKAAGMYSALPYAFAQVAIETIYIAIQTLIYSFILYAMIGFH
WTVGKFFLFYFFVFMCFVYFTMYGMMLVALTPNYHIAAIVMSFFLSFWNLFSGFLIPRTQ
IPIWWRWYYWASPVAWTIYGLVTSQIGDKNNPIEIPGGGEVSIKLYLKDSFGFEYDFLGV
VAVVHVAWAVFFCFVFAYAIKFLNFQRR
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggagataacattaggccaggatgagctggccaagtcaatgagtcgtcgatctatgagt
aagagtattcgatcagtaagttcaaggagttgggcatcagctagtgttagagaagtgatg
tttacagcaccaggaggtggtgatgtttttcagaaaagtacacgtgaaaatgacgatgaa
caagagctaaaatgggctgctattgagagacttcctacttatgataggctaaggaaaggg
attttgagacaaacgttggacgatggaaagataaattatcatgaagttgatgttgttcat
cttggattacaagataggaaacagattttagaaagtatacttaaagttgttgaggaagat
aatgagaggtttcttagaagacttagaggcaggactgatagggttggaattgagattcca
aaaatcgaagttcgttttgaggatctttgtattgatggagatgcatatgttggatctaga
gcattgcctactctgtggaatgcttcaatcaattttgtagaggggtttcttgaaaagatc
aagattgtcccttcaaagaaacgggttgtcaacatactgcgtgatgtgaatggaatcgta
agaccctcaaggatgacgttacttctggggcctcctggttctggaaaaactacattgcta
aaagcacttgctgcggtgctagataaggacctaagagtgaacggaaggatcagttactgt
ggtcaggaactgtcagagtttatacctcaaaggacatgtgcttatattagtcagcatgat
gttcatcatggagagatgacagttagagagacgctggattttgcaggacgttgtttagga
gttggaacaagatatgagctccttactgaattgtcaaggcgtgagaaggatgcaggaatc
aaacccgatcctgaaatagatgcatttatgaaagctacagctgttgcaggccaagaatct
agtcttgtcacagactatgctcttaagatacttgggatggatatatgtgctgatatattg
gtcggtgatgatatgagaaggggtatctctggtggacagaagaagcggctcacaacagga
gaaatgttggttggccctgctaaagttttcttcatggatgaaatatcaactggcctcgac
agctcaaccacatttcaaattgtgaaatacatgaggcagatggtccatattatggacgta
accatgataatctctcttctacaacctgcaccggaaacctatgatctttttgatgacatt
atattgctttctgagggaaaaattatctaccaaggtccacgtgagaacgtactggagttt
ttcgagagtgttggattcaaatgcccagaaaggaaaggagttgctgactttctgcaagag
gttacttctctgaaggaccaagaacagtattggttcagaagaaatgaaccttaccaatat
atttcagttgctgaattcgctgaacgctttagaaattttcatgttgggcaacaacttctt
gatgaccttagagttccttatgacaaaaacaaagcccatcctgctgcactggttactgag
aagtatggtatctccaacatggaactcctcaaggcatgcttatcgagggaatggctattg
ataaagcggaattccttcttatacatatttaagacatttcagatcactgtgatgtcaata
attgccttcacagtattctttaggacagagatgaaaactggtcagctcgcagatggaggc
aaattttttggcgccttgtttttcagcctcatcaatataatgtttaatggtacagcagag
cttgcactaaccattttcagacttcctgtgttctttaaacagagagattctttgttttac
ccagcttgggctttcgctcttcctatttggcttttaaggattcccatttcgtttatcgaa
tcactgatatgggtcttactaacttattacaccatcgggtttgctcctgattttactagg
tttttgcgccaattcttggtattttttgctttgcatcagtcggctctatctctattccgt
tttgttgctgcacttggaaggtctcaagtagttgctaccacttttgcaactttcacaata
ctaatagtctttgtgcttggtggtttcattgttgcaaaagatgacctcgaaccatggatg
agatggggctactacatatctcctatgacatatggacagaatgcaattgccatcaatgag
tttctggacgaaagatggaatactcccaacaatgacacaagattttctgagccaacagtc
ggcaaggttcttctcaaggcaaggagcatgtacacttcagactatgttttctggctctgt
gttgttgccctatttgcgttctcgtttttgttcaacatttgctttatcttcgcactgaca
tacctaaacccatttggagattctagatcagttaattcagatgatggcaaaagtaagaaa
acgaaacaaacagaatggacttcagcatcttcagctccactgactgaaggtatagttatg
gatgtaaggaacactaacaactcaagtattgaagaggccaagaaaagaggaatggtgctt
cctttccagccactgtcccttgcatttaatcatatcaattattatgtcgatatgccatct
gaaatgaaagcccaaggtgttgacgagactcgtctccaattgttacgagatgttagtggt
gctttcaggcctggagttcttacagccttagttggtgtgagtggtgctggaaagaccaca
ttaatggatgtcttagcaggaaggaaaacggaaggctacactgaaggaagcatcaacatt
tctggctatccaaagaatcaatcaacttttgctcgcataagtggttattgtgaacagaat
gacattcattctccacatgttactgtttatgagtcattggtatactcagcttggttgcgt
ctatctccagatgtaaaagaatatacacggaagaattttgttgaggaaataatggagcta
gtcgagttgaatccactgagggactccctagtaggccttccaggggtagatggtctctca
actgaacagaggaagaggctgactatagctgtagagctagtagcaaatccatctattatt
ttcatggatgaaccgacatcaggacttgatgctagagctgcagcaattgtgatgcgaact
gtgagaaacactgtggataccgggagaactgttgtctgcactatccaccagccaagcata
gatatctttgaagcatttgatgagctgttattgatgaaaagaggaggacaagtcatatat
gcagggcctcttggtcatcattctcacctactgatcgagtattttcaatctattccaggg
gttcctggaatcaaagagggatataatcctgctacttggatgttggacatctcttctctg
gccgttgaggctcaacttcaagtagactttgctgacatttatgccaactctgagttgtat
aggaggaatcaagaacttatcaaagaactaagcattcctgcaccaggattcaaagatctt
catttccccacggaattctcccaaccgttttttgaacagtgcaaggcttgcttttggaag
caacacttgtcctattggaggcatccacagtataatgcctttcggtttgctatgacaaca
atgataggagtaatgttcggaatcattttttggaataaggggaaccaactgtccaaacta
caagacctgttaaatattgttggagctatgtatgctgctgtcatgttcctaggtggaact
aatacttcagccgtacagtctattgttgctgtagaaaggactgtcttttatcgcgaaaaa
gcagcaggaatgtattctgcacttccttatgcatttgctcaggttgcaatagagactatc
tatattgcgattcaaactttaatttacagctttattctatacgcaatgattggattccac
tggacagttggaaagttcttcttgttctacttctttgtattcatgtgcttcgtctacttc
acaatgtatggaatgatgcttgttgcactcactccaaactaccacattgctgcaatcgta
atgtcattcttcctcagcttttggaacttgttctccggtttcctcattccaagaacacaa
attcctatatggtggaggtggtattattgggcttctccagttgcatggacaatatatggc
cttgtaacgtctcaaataggcgacaagaacaaccccattgagattccaggaggcggcgag
gtatcaataaagttgtatctgaaggacagctttggttttgagtatgacttcctgggagtt
gttgctgtagttcatgttgcttgggctgttttcttctgctttgtttttgcttatgccatc
aagttcttgaatttccaaaggagataa
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