Solanum stenotomum: 125844082
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Entry
125844082 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125844082
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125844082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125844082
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
GTPases
125844082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
GTP_EFTU_D2
EFG_III
SRPRB
MMR_HSR1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
125844082
NCBI-ProteinID:
XP_049379279
LinkDB
All DBs
Position
11:complement(2408587..2412443)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGDSDGEKIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGKLRFMDYLDEEQRRAI
TMKSSSIGLKYKEHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLIVELRLTPLEAYTRLQRIVHEVNSIVSAYKSEKYLSDVDSL
LSAPSGLVEDENPDLEFLEEDEEDTFQPQKGNVAFVCALDGWGFSISDFAEFYASKLGAS
SAALQKALWGPRYFNAKTKMIVGKKGISSGSKARPMFVQFVLEPLWQVYQAAVEADGDKG
MLEKVIKSFNLAIPPRELQNKDPKSVLQSIMSRWLPLSDTILSMAVKHMPDPISAQSFRI
SRLLPKRALLDMGANPDVLSEAELVRKSVESCDSSPDAPCVVFVSKMFAIPSKMLPRGEI
MDDSGNGDSDECFLAFARIFSGVLHAGQKIFVLTALYDPLKEESMQKHVQEAELQSLYLM
MGQGLKPVASAKAGNVIAIRGLAQHILKSATLSSTLNCWPLSSMTFQVSPMLKVAIEPSD
PADMGALIKGLRLLNRADPFVEVSISARGEHVLAAAGEVHLERCIKDLKERFAKINLLVS
APLVSFKETIEGDTANPLENLKLLSRSSDYLEKETPNGRCVVRVRVMKLPTALTKLLDES
FELLEDIIGGKSLQACRSSETLRGNIVEDENPIEAFKKRLIDAVESDFSTGFADTEKDRI
DKCKKTWQKFLKRIWALGPRQVGPNILLTPDVKGKSDDVSVLIKGPPYVSKKLGFTDDND
DSSASPESSTCVDPTLLREAENLESSILSGFQLATASGPLCDEPMWGLAFVIEASISPLA
TQPNDSDTPIPQPEQYGLFPGQVMTVVKDACRAAVLQRKPRLVEAMYFCELNTPHDQLGN
TYTVLNRRRAHVVNEEMQEGSSLFTVHAYVPVAESFGFSDELRRKTSGAASALLVLSHWE
ALPEDPFFVPRTEEEKEEFGDGASVPQSIARKLMDSVRRKKGLPVEEKVVQFATKQRTLA
RKV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgggggattctgatggtgagaagattcggaacatatgtattcttgctcatgtggatcat
gggaagacgacattggctgaccatctgattgcttcatctggtggtggtgtactccatccg
aagcaagcgggtaagcttaggtttatggattatttagatgaggagcagaggagggcgata
actatgaagagttcttctataggtcttaaatataaggaacattcgattaatcttatagat
tctcctggtcatatggacttctgtagtgaagtttcaactgcagcccgtttgagtgatggt
gcattggtattagtggatgctgtggagggtgttcacattcagactcatgcagttttgcgt
caggcgtggattgagaagcttaccccgtgtctggttttgaataagattgataggttgatt
gttgaattgagattgactccgctggaggcgtatactcgcttgcagaggattgttcatgag
gttaatagtatagtgagtgcctataagtctgaaaagtatttgtcagatgttgattctctg
ctctctgccccgtctggactagtggaagatgaaaatccagatctagaattcttagaggag
gacgaagaggataccttccaaccccagaaggggaatgtcgcgtttgtatgtgcattagat
ggatggggcttcagtattagtgattttgctgagttttatgcttcgaaacttggtgcaagt
tcggctgccttgcagaaggcattatggggacctcggtattttaacgccaagactaagatg
attgtaggtaagaagggaattagtagtggaagtaaggctaggcccatgtttgtgcaattt
gttcttgagccactttggcaggtttatcaagctgctgtggaagctgatggtgacaagggg
atgcttgagaaagttataaagtctttcaatttggctatacctccccgcgaacttcaaaac
aaggatcctaaatctgtgcttcaatctattatgagtcgttggcttccattgtccgatacc
atattgtctatggctgtcaaacacatgcctgatcctatatctgctcagtctttccgtata
tctcggctgcttccaaagagagcactcttagatatgggtgcgaaccctgatgtgctttct
gaagccgaacttgtcaggaaatctgtggagtcctgtgattctagccctgatgcaccttgt
gttgtttttgtttctaagatgtttgctattccatcaaaaatgcttccgcgtggagagatt
atggatgacagcggaaatggtgactctgatgaatgtttccttgcatttgccaggatcttt
agtggggttcttcatgcaggacagaaaattttcgtgcttacagcattgtatgatccacta
aaggaagaatcaatgcagaagcatgtgcaagaagccgagttgcagtctttgtatttgatg
atgggtcaagggttgaaacctgtggcatcagcaaaggctggtaatgtcatagctatccga
gggcttgcccagcatatattgaagagtgcgactctttcatctacgttaaattgttggcct
ttatcaagtatgactttccaagtttcacccatgcttaaagttgcaattgaaccttctgat
cctgctgacatgggtgcacttattaaaggtttgaggctgctaaacagagcggaccctttt
gttgaggtttctatttctgctaggggcgaacatgttcttgctgcagcaggtgaagtgcac
ctggagagatgcattaaagatttaaaggagagatttgcaaagataaacttgttagtctct
gcgccccttgtatctttcaaagagaccatcgaaggagatactgctaatcccttagaaaat
ttgaagctattgagccgcagctctgattatttggagaaagaaactccaaatggaagatgt
gttgttcgagtgcgtgttatgaagcttccaactgcattgacgaagctgcttgatgaaagt
tttgagttgcttgaagacatcattggaggaaaatctctacaggcttgtagaagctcggaa
actctcagaggtaacattgtagaagatgagaatccaattgaagcattcaagaaacgccta
atagatgctgtggagagcgacttttctactggatttgctgatacagaaaaggataggatt
gataaatgtaagaaaacatggcaaaaattcttgaagaggatctgggctttagggcctaga
caggtcggtcccaacatcctcctcactccagatgtgaaaggaaagagcgacgatgtttct
gttcttataaagggtcccccctatgtatcgaaaaaattgggctttacggatgacaatgat
gatagcagtgcatcaccagaatcatcaacctgtgtggatccgacccttctacgagaagct
gagaatcttgaaagcagtatattatctggattccagttagctacagcatctggccctttg
tgtgatgagccaatgtggggtttggcatttgttatcgaagcttccatatctccattagct
acgcaaccaaatgatagtgacacacctattccacagccagaacagtacgggctcttccct
ggacaggtgatgactgttgttaaggatgcctgcagggctgctgttctccagagaaaacct
cgacttgttgaagccatgtacttttgtgagctgaacaccccacatgaccagttgggcaac
acttatacagttcttaatcgtaggcgtgcccatgtggtaaacgaagaaatgcaggaaggt
tcttccttgttcactgtacacgcttatgtgccagttgcagaaagctttggattctccgat
gagttgaggagaaagacttctggagctgcaagtgcactactcgttctcagccactgggaa
gcccttccagaggatcctttctttgtacctaggaccgaggaggagaaagaagaattcggg
gatggtgccagtgtgccacagagtatagcaagaaaactcatggattctgtgagacgaaag
aaaggccttccagtagaggaaaaagtagtacaattcgcgacaaagcagaggacgttggct
cgcaaggtgtag
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