KEGG   Solanum stenotomum: 125844086
Entry
125844086         CDS       T08385                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
sstn  Solanum stenotomum
Pathway
sstn03030  DNA replication
sstn03410  Base excision repair
sstn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    125844086
   03410 Base excision repair
    125844086
   03420 Nucleotide excision repair
    125844086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sstn03032]
    125844086
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125844086
Enzymes [BR:sstn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     125844086
DNA replication proteins [BR:sstn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    125844086
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      125844086
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 RNase_H_2 DNA_pol_B_exo2
Other DBs
NCBI-GeneID: 125844086
NCBI-ProteinID: XP_049379283
LinkDB
Position
11:complement(6412670..6446316)
AA seq 2218 aa
MNAAENSRRWDRRDSRFSKKQKLILNSEEQLESKLGFDAFTEGDKRLGWLLTLASSSWED
QETRKVYSCVDLYFVCQDGSTFKAKYKFRPYFYVATKDKMEMDVDSYLRRRYESQIADIE
VLEKEDLDLKNHLSGLHRSYLKISFDTVQQLMDVKRDLTHIVERNQTKFDTIEAYESILT
GKSKQRSQDFIDYITDLREYDVPYHVRFAIDIDVRCGQWYDVSVSSSNVMLEKRTDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDSIMMISYMVDGQGYLIINRECVGEDIEDIEYTPKP
EYEGHFKVTNVKNEEGLLRHWFAHMQVAKPGIYVTYNGDFFDWPFVETRATHYGLSLKDE
LGFSCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RFAKEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAYKANVICPNKHQSDPEKFYGSQLLDSETYIGGHVECLESGVFRSDIPTSFKLDPSA
YELLISNLDRDLQYSIVVEGKMDLESVTNYDEVKNAIMEKLMSLRDDPLREECPLIYHLD
VAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKKCLRKLEWVWRGEMYMAKRSDYYHI
KRQLESELVEVGDGQRSKSFLDLPKAEQQVKLKDRLKKYCQKAYKRVLEKPVTEVREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVVYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWC
ALPGSFPENYTFKTKDPKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPINKTYTIHSEC
SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
ELFDKFLHGSTLEECYSAVAAVADRWLDLLDNQGQDIADSELLGYISESSTMSKSLADYG
EQKSCAVTTAKRLADFLGDAMVKEKGLLCQYIVACEPQGTPVSERAIPVAIFETNAEIMR
FYVKKWCKISSEIGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVSNPVPRVVHPDWLHK
KVREKEDKFRQRKLNDIFSSVNKDDTVASKHSKNQQNFEDLEDFRHSGKSSIFGPRPVVH
RHGVNKEHLVNTSDRLDSQQKNGHASSPSKMLPSQEIADVEDIDRNVDYHGWLQQKKRKW
KEIREERKRQRLDTSRTVNHVNGSTDMFHSMANRKRQGKTGVNSYFERHELALTRNHWQI
VQLEPTSQHGQFFAWVVVEGVMHKISVTIPRVFYLNSKAPITEEFPGRRVNKILPHGRHS
YNLIEVTIDEDQFKSESKKLAAHLADPEVEGIYETKVPLEFSAILQMGCVCKVDKATKKR
NPQDGWSLSELHMKTTTECPYLDQSITFFYLYHSVSDVRAIYVGHFPASKMIHVVVVNPF
QNKELSQNVLERHFYEACQTLSGQPITQKEGISFKLDYVGYIKDAEKILQRAVNEHRHHG
PAVAMIECPNAHLLKSGIRALEDFPCISIPCNARDSQYQALGWQNVAAKIGMQRCATSSQ
WLNERITLSRYAHVPIGNFDVDWLMHTADIFFSRALRDQQQVLWISDNGIPDLGGINDEV
SSFMDEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGTLFGLDQDLNPTT
NFTNEQYFFDATTSCAPAFRVLKQLIQRCLTDAVTSGNIFADAMLQHLYRWLCSPRSRLH
DPALHSMLHKVMQKMFALLVAELRKLGAAIVFANFSKIIIDTGKSDIFAAKAYCDNVIKN
VQSRELFEWIELEPLQFWHSLLFMDQYNYGGIRARHSDEPLEVNSEPGEESVCGESQVDI
VSSWNIAENLPKATQDRFILIVSEFMYGPWKYAQEQATHRVSTSDGDLCTPSITAALAET
FDLQMAEDLKKKIGTYFTDKLLKIVCDPNLQMKVMNNSQKIQETPDANSQSISHVQKGDP
ALEFIKHVCAVLALDQNVQHEVLIMRKNLLKLVRVREFAPEAEFRSLSVSYTLPNVICSY
CNDCRDLDLCRDRALISQEWRCAVPQCGQPYDREAMENALVQIVRQRERLYHLQDLVCLK
CHQIKAAHLSDHCACAGSFSCKEDVSDFRNKMQIFLNIAVNQKFQLLQECTSWILEAR
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgaacgccgctgaaaatagccggcgctgggaccggcgagactctaggttttcaaagaag
cagaaactcatacttaactccgaagaacagctcgaatccaagctaggattcgatgctttc
actgaaggagataaacgactcggctggcttctaactcttgcctcttcgtcgtgggaggat
caggagactcgcaaagtgtacagttgtgttgatctttattttgtttgtcaggatggttca
acattcaaagcaaagtacaaattcaggccatatttttacgtggcaacaaaggataaaatg
gagatggatgtcgactcatatctgagaaggcgatatgaatctcaaattgcagatattgaa
gttttagagaaagaggatcttgatcttaaaaaccatctgtctggtctacacagatcatat
ttaaagatatcatttgacactgtccaacagttgatggacgtgaagcgtgatctaacacac
attgttgagagaaatcaaacgaagtttgatactatagaagcatatgaatctatactgacg
gggaaaagcaagcagcgaagtcaagattttatagattatatcactgatctacgtgaatat
gatgtcccctaccatgttcgctttgccattgacattgatgttagatgtggtcagtggtat
gatgtgagtgtatctagctccaatgttatgttggagaagaggactgatctcttgcagcga
gctgaagttcatgtttgcgcctttgatattgaaaccacaaagcttcctcttaaatttcct
gatgccgaatatgattccataatgatgatctcatacatggttgatggccaaggctatctc
attattaacagagagtgtgttggggaagatattgaggatatagagtataccccaaaacca
gaatatgaagggcattttaaagtgacaaatgtgaaaaatgaggaagggctccttaggcac
tggttcgcgcacatgcaagtggcgaagcctggtatctatgtaacatataacggtgacttc
tttgattggccatttgttgagacaagagctactcattatggcttgagcctgaaggatgag
cttgggttttcctgtgacaagaatcaaggggaatgtcgtgctaaatttgcttgccatctg
gactgttttgcttgggtcaaacgtgatagttatcttcctcaaggaagccaaggtctgaag
gctgtaacgaaggccaagttgggttatgatcctctagaagttaatcctgaggatatggtt
cgctttgcaaaggaaaaaccacagatgatggcttcatattctgtttcagatgctgtttca
acatactacttgtacatgacttacgttcatcccttcattttctcccttgcaaccataata
cccatgccgccagatgaagtcttgcgcaaaggaagtgggactttgtgtgaaatgcttctt
atggttcaggcttataaggcaaatgttatctgtccaaacaagcaccagtctgatccagag
aagttttatggtagtcaactccttgacagtgagacatacattggtggtcatgtggaatgc
ctagaaagtggtgtattcagatctgacatcccaaccagttttaaactcgatccctctgcc
tatgagctattgatcagcaaccttgatagagatctgcagtattccattgttgttgagggg
aagatggacttggaatctgtcacaaattatgatgaagtgaagaatgccatcatggaaaag
ctaatgagcttacgagatgatcctttaagggaagaatgccccctcatatatcatcttgat
gtagctgccatgtatccaaacatcatacttacaaataggcttcagccaccatcaatagta
tcagatgagatatgcactgcatgcgattttaatcgtcctggcaaaaagtgtctccggaag
cttgaatgggtttggcgtggtgaaatgtacatggcaaaaaggagtgattattaccacata
aagagacaactcgagtctgaacttgttgaagtaggagatggtcaacgatcaaagtctttt
cttgatttgcctaaagcagaacaacaagtaaagctcaaggaccgtttaaagaaatactgt
caaaaggcatataaaagagttcttgaaaagccggtcacagaagttcgagaagcagggatc
tgcatgcgagaaaatcctttttatgttgatactgtacggagtttccgagataggaggtat
gaatacaaagggctcaataaagtttggaaaggtaagctgtctgaagcaaaggctagtgga
aattccataaagattcaagaagcacaggacatggtagttgtgtatgattcattgcagctg
gctcataaatgcattttaaactccttttatggttatgtcatgcgcaagggtgcaagatgg
tactcaatggagatggctggagttgtcacatatactggtgcaaaaatcattcagaatgct
cgattgttggttgaaaaaattggaaagcccctcgaattagacacagatggtatttggtgt
gcattaccaggctctttccctgagaattataccttcaagacaaaagatccaaagaagaag
ctgacaatctcttatccttgtgtaatgctgaatgttgatgtggcaagaaacaataccaat
gatcagtaccagacactcaaggaccccatcaataagacgtatacaatacacagtgaatgc
tcaattgagtttgaagtggatggaccatataaggcaatgattcttcccgcttccaaggaa
gaaggtattctaataaagaagcgctatgcagttttcaatgatgatggtacgcttgccgaa
cttaaaggttttgaaattaaacgtagaggtgagctaaagctcatcaaagtatttcaggct
gagctttttgataagttcctccatggatcaaccttagaggaatgctattcagcagttgct
gctgtggcagatcggtggcttgacctgcttgataatcaaggccaagatattgcagacagt
gagttgctcggatatatatctgaatcaagcacaatgagcaagtccctggccgattatggt
gagcaaaagtcatgtgcagtaactacagctaaacggcttgctgattttctgggggatgca
atggtcaaagagaaaggattgctttgtcaatatattgttgcatgtgagccacagggaacc
ccagtaagcgaacgtgctattcctgttgcaatatttgaaactaatgctgagatcatgagg
ttctatgtcaaaaagtggtgcaaaatatcatcagaaatcggaatacgctccattattgat
tggtcttattacaagcagcgacttagttcagcaatccaaaagattatcacaattcctgct
gcaatgcagaaggtttcaaaccctgtcccaagggtggttcatcctgattggctgcataag
aaggttcgtgaaaaagaagacaaatttcgccaacgaaaattgaatgatatcttcagttca
gtgaacaaagatgacacagtggccagtaaacattctaaaaatcagcaaaattttgaagac
ctggaagactttagacacagtggtaaatcgtctatatttggtccaaggcctgttgttcat
cgtcatggagtcaacaaagaacatctagtgaacactagtgatcgattggacagtcaacag
aaaaatggtcatgctagcagtccatccaagatgttaccatcacaagaaattgctgatgtg
gaagatattgacaggaatgtagattatcatggatggctacagcaaaaaaagagaaaatgg
aaagagattcgtgaagaaaggaaacgccaaaggttggatacgtcgaggacagtaaaccat
gttaatggcagtactgacatgtttcatagcatggcaaatcgcaaacgccagggcaaaact
ggggttaattcctactttgagcgacacgaattagccctcacacgaaatcactggcagata
gttcaacttgaaccgacttcacaacatggacaattttttgcatgggtagttgtggaagga
gtcatgcacaaaatttcagtaactatccccagagtgttttacctcaactccaaagctcct
ataactgaggaatttcctggaagacgtgtcaacaagattcttcctcatggacgccatagc
tacaatttaattgaggtcactattgatgaggatcaattcaagtcagaaagcaaaaagcta
gcagctcaccttgctgacccagaagtggagggaatatatgaaacaaaggttccattagag
ttcagtgctattcttcagatgggttgtgtttgtaaagttgataaagcaactaagaaaagg
aatccacaagatggttggagtttgagtgagctgcatatgaagacaacaactgagtgcccg
tatttggatcagtcaataactttcttctacttatatcatagtgtgtcggatgtacgagcc
atttatgtgggacattttcctgcatccaagatgatacatgttgtggttgtcaatccattt
caaaacaaggaattatcacaaaacgttcttgaaagacatttttatgaagcgtgccaaaca
ttgtctgggcagcctatcacacaaaaggaaggtattagtttcaagttggattatgtcggg
tacatcaaggatgctgagaagattctacagagagcagttaatgagcataggcatcatgga
cctgcagttgccatgattgagtgccctaatgcccatttactgaagtctggcatacgagct
ttggaggattttccttgcatcagcatcccatgtaatgctcgggatagtcaatatcaggca
ctaggttggcaaaatgtagcagcaaagattggaatgcagcgatgcgcgacatcctcccaa
tggttaaatgaaaggatcactctctcaagatatgcccatgttcccatagggaattttgat
gttgattggctcatgcatacagcagatatcttcttttccagagcacttcgtgatcagcaa
caggtcttgtggatatctgataatggaatccctgacttaggaggcataaatgatgaagta
tcatcttttatggatgaggtcaatcaaccagttcttacttatcctggtgcatatagaaaa
gttactgttgagctgaagattcatcatctggctgttgatgctctactgaaaagcaaccaa
gtaaacgaaatggaaggaggcactctgtttggattggaccaggacttgaaccctacgacg
aattttactaatgaacagtacttctttgacgcaacaacatcctgtgcaccagcatttcgt
gtacttaagcagttgattcaaaggtgccttacagatgcagtaacatcaggaaacatattt
gctgatgcaatgctgcaacatttgtaccgatggctctgcagcccccgatctagactgcat
gacccagctcttcacagtatgcttcacaaggttatgcaaaagatgtttgcattgcttgtg
gctgaactccgaaaattgggtgctgctattgtgtttgccaacttctcaaaaatcataatt
gacactgggaagtcagatatttttgctgccaaagcctactgtgataatgttattaaaaat
gtacaatcaagagaattgtttgagtggattgaacttgagccgttgcagttttggcactcg
ttgcttttcatggatcagtacaattatggtggaattcgagctagacatagtgatgaacct
ttagaagttaactcagaaccaggtgaagaaagtgtgtgtggtgaatctcaagtcgatatc
gtgtcaagctggaacattgcagaaaatttaccgaaggcaactcaggatcgcttcattttg
attgtttcggagtttatgtatggtccatggaaatatgcacaagaacaagctacacatcga
gtatctactagcgatggtgatttatgtacaccatcaatcactgctgcacttgctgaaaca
tttgatttgcaaatggcagaagatctaaagaagaagattggaacttacttcactgacaaa
cttctgaaaattgtttgtgaccctaatcttcaaatgaaagtgatgaacaactctcagaag
atccaggagacaccagatgcaaactcacaatctattagccatgtccaaaagggggatcca
gctttagagttcattaagcatgtctgtgcagttttggcccttgaccagaatgtgcagcat
gaagttctgatcatgaggaaaaatttattaaaacttgttcgtgtgagggaatttgctccg
gaggcagaatttcgtagtctttctgtatcatatacccttccaaatgtcatttgcagttac
tgcaatgactgcagagaccttgacttgtgtcgagacagagctttgatttctcaggagtgg
cgttgtgctgttccccagtgtgggcaaccttatgatcgtgaagcaatggaaaatgctctt
gttcaaattgttcggcagagagagaggctataccatcttcaggatctagtatgcctaaaa
tgccaccagattaaagctgcacatttatcagatcactgtgcttgtgccggatcatttagc
tgcaaggaagatgtctcagatttccgcaataaaatgcaaatcttcttgaacatagccgta
aatcaaaagtttcaattgctccaagaatgcacttcttggattttggaagccagataa

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