Solanum stenotomum: 125844218
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Entry
125844218 CDS
T08385
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125844218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125844218
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125844218
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
U-box type E3
125844218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
HEAT_2
MLKL_N
zf-RING_UBOX
Arm_2
KAP
zf-C3HC4_4
zf-Nse
zf-C3HC4_2
MCAfunc
zf-C3HC4
zf-RING_2
MG280
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
125844218
NCBI-ProteinID:
XP_049379448
LinkDB
All DBs
Position
11:complement(7863276..7871458)
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AA seq
664 aa
AA seq
DB search
MGEEDKGEVAKKLIEIVNDISNISDYKISVKKQFCNLARRLKLLIPMFEEIRDNKEKLPV
ESMKSLISLKETLESAKELLKFGSEGSKIYLVLEMEHIMNKFQELTSQLEQALNGIYYEK
LEISDEVKEQVALVLSQFQRAKGRVETPDAELHEDLLSLYSRSNDAAVDQDVLRRLVDKL
QLTELDDLKQESLALHEMVIATDGDPEERIEKMSMLLKKIKDFVQTENPNIDAYGRDKSS
NFSGQVSADGSQKAPVIPDDFRCPISLELMTDPVIVSTGQTYERSCIEKWLEAGHSTCPK
TQQALTSKSLTPNYVLRSLIAQWCEANGIEPPKRPGSSPPKKSASACTPAEHSMIENLLR
KLKSGSPEEARSAAGEIRLLAKRNTDNRVAIAEAGAIPLLVHLLSTPDSRTQEHAVTALL
NLSICENNKGHIVTSGAVPGIVHVLRKGSMEARENAAATLFSLSVIDENKVTIGSSGAIP
PLVALLSEGTQRGKKDAATALFNLCIYQGNKGRAIRAGVVPTLMQLVTKPQGGMVDEALA
ILAILSSHPEGKAAIGAADAVPVLVDVISNGSPRNKENAAAVLVHLCSGDQHHLVEAQRL
GLIGPLTDLVQNGTERGRRKATQLLERMSRLAEQTKQPQAQAESQTQNQVSRSPPASSTN
AIES
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaagataaaggagaagtagctaaaaagttgattgaaatagttaatgatata
tcaaacatatcggattataaaatttcggtgaagaaacagttctgtaatttagctagaagg
ctcaagttgttgattccaatgttcgaagagattcgtgataacaaagagaaattaccagtt
gaatctatgaaatcgttgatttcattaaaagaaactcttgaatctgctaaggaattgctc
aaatttggtagtgaaggcagcaagatttatctggtgctagaaatggagcatatcatgaat
aaatttcaagagctgacatcccagcttgaacaagctttgaatggaatttattatgaaaag
cttgaaatatccgacgaagttaaagaacaggttgcacttgtcctttctcagttccaaaga
gccaaaggaagggttgaaacacctgatgctgaactgcatgaagatttgctgtctctttat
agcaggagtaatgacgccgctgtagatcaagatgtcctaaggaggttagttgataagcta
cagctgaccgagttagatgaccttaaacaagaatcactagctttgcatgaaatggtcatt
gctactgatggggatcccgaggagagaatagagaagatgtcaatgctactgaagaaaatc
aaggacttcgtacagactgagaatccaaacattgatgcttatggaagagataagtcttca
aattttagtggacaagtatctgcagacggaagccagaaggcaccagttataccggatgat
tttcgttgccctatttccttggagttgatgacagatcccgtcattgtttcaactggacag
acctatgaacgatcttgtattgagaagtggctggaagctggacatagcacttgtcccaag
actcaacaagccctcacaagcaaatctctgacacccaactatgtattgcgtagccttata
gcacaatggtgtgaagcgaatgggattgaaccacctaaaagaccaggcagttctccaccc
aaaaagtctgcatctgcatgcactcctgctgagcactcaatgatagagaatcttctgaga
aagctcaaatctggtagccctgaagaggcgcgttctgctgcaggtgaaatccgccttctt
gctaagcgtaatactgataaccgtgttgcaatagctgaagctggtgccattcctctgcta
gtccatcttttatccacacctgattctcgaactcaagagcatgctgttacagcacttctc
aacctttccatatgtgagaataataaaggacacattgtaacttcaggggcagtgcctggt
attgttcatgtactcaggaaggggagcatggaagcacgtgaaaatgcagcagccaccctt
ttcagcctttcagttatcgatgaaaataaggtcaccattggttcttcaggagcaattcct
ccgcttgtggcgttactaagtgaaggtacacaaaggggaaagaaagacgcggctacagca
cttttcaatctatgcatttatcaagggaacaagggcagggcaataagggctggagtggta
cctacattgatgcagctggtcacaaaacctcaaggtggtatggttgatgaagcacttgct
atattagcaatcttgtcaagtcatccagaagggaaggcagctatcggagctgcagacgcg
gttcctgttttggtagacgtgatctcaaatggttctcccagaaacaaagaaaatgctgct
gcagttttagtacacctctgctctggggaccaacatcatctggtcgaagcacagcgactt
ggtttgataggtcctttgacggatttagtacaaaatggaactgaaagaggcagacgaaaa
gcaacccaactgcttgaaagaatgagcagacttgccgagcagacaaaacagccccaggcg
caagccgagtctcaaactcaaaaccaggtctcgcggtcaccaccggcctcatcaactaat
gccattgagagttga
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