Solanum stenotomum: 125844495
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Entry
125844495 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125844495 isoform X1
KO
K23288
syndetin
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125844495
Membrane trafficking [BR:
sstn04131
]
Protein recycling
Others
EARP complex
125844495
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
125844495
NCBI-ProteinID:
XP_049379764
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All DBs
Position
11:7047341..7075594
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AA seq
1098 aa
AA seq
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MQSNSSPPFPLIPLVLFNGGQLSEGGFELSRFLFLGSLLFSQGGDDGMDLSKVGEKILSS
VRSARSLGLLPSSSDRPEMKVCLQVPERAAAAAALARVLAGLPPHQRYTLSSSSEELSSI
YGSKPPGQVVEELEEEFYEEEFDPVGHILEHMPSEESELAYLEDQATLRLSQLDRISERL
SRHVMEHHEVMVKGMDLVRQLERDLKIANVICMNGRRYLTSSRNEVSRDLIVSNNSKRKQ
ALLDVLPVLTELRHALNMQSTLETLVEEGRFSKAFQVLSEYLQLLDTLSELSAAQEMSRG
VEVWLGKTLQKLDSLLLGVCQDFKEENYVTVVDAYALIGDVAGLAEKIQSFFMQEVLSET
HSALKTTVQEDLDNNNVPSSRLTYSDLCTQIPESKFRQCLLATLAVLFRLMCSYHAIQSF
QPEDKEDISSPSTERAQTLASVEDPSTTSVASSDTAMHGSSNINYRVEEARDDGSTASSS
GSPWFQLRKDATTFVSHTLLRGRKNLWQLTTSRAAVLLSSPAIHSSSIHQFLITYEDLNI
FVLAGEAFCGSEAVEFRQKVKSVCESYLAAFHRQNIHALKMVLEREHWLILPPETIEVVS
FAGLVGDGAALIVSSETSPNTRLLQVRKPVHPIQTKSSKRNGFSSWLKGGNPFLPKLNGS
SREYLESCLPNGSAMQESGNSNEDSLDKSSLRNSDVIHVNGNTNLSEDENEDLHADFIDE
DSQLPSRISKPGHSRSRSSHWSNEQIKEQTGSSLSLLRSLDKYARLMQKLEIVNVEFFKG
FCQLFGIFFHFVFETFGQQSIHPSGKAVTDTLSHRLKTALLRITHDCDQWMKPQSQSFSS
SSPSSSSTSFPHMDVTPTSPRSYLTGASLGLKERCAGADTIYVVARLLHRSKAHLQSMLQ
NNAALVEDFYVHLVDAVPDLVDHIHRTTARLLLHINGYVDRIANAKWEVKELGVEHNGYV
DLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGVDNVAEILVEGLSRVKRCTDEGRALMSLD
LQVLINGLKHFISVDVRPKLQIVETFIKAYYLPETEFVHWSRAHPEYSKSQIVGLINLVS
TMKGWKRKTRLEILEKIE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaattcttctccgccttttcctttgattccacttgttctattcaatggcggt
caattgagcgaaggtgggtttgaattatctaggtttttgtttttgggttctttgctcttc
tctcaaggaggcgacgacggtatggacttgtctaaagttggagagaagattttgagttcc
gttcgttctgctagatctcttggtcttctcccttcttcttctgatcgtcccgagatgaaa
gtttgcctgcaggttcctgaacgagctgcagctgctgctgcacttgcacgtgttctagct
ggactacctcctcatcagagatacactctttcatcaagctcggaagaactgagctcaata
tatgggagcaaacctcctggtcaagttgtcgaggagctggaggaagaattctatgaagag
gaatttgatcctgtcggacatattctggagcatatgccatctgaagagagtgaattagct
tacttggaagatcaggccactcttagattatcacagctggacagaatttctgaacgcttg
tctcgccatgttatggagcatcatgaagtaatggtgaagggaatggatcttgtgagacaa
ctagaaagagacttgaagattgcgaatgtcatttgcatgaatggtcgccggtatttaacc
tcttcaaggaatgaggtttcaagggatctcattgtctccaacaattctaaaagaaaacaa
gcactcttggatgttcttcctgtcctgactgagctgcgccatgcactaaacatgcaatca
acacttgaaactcttgttgaggaaggaagattctcaaaggcattccaagtactatcagaa
tatttacaacttttggacacactttcagagctttctgccgcacaagagatgagccgtggt
gttgaggtttggttagggaaaactcttcaaaagctggattcacttctattaggagtgtgc
caggatttcaaagaggagaactatgtaactgtagttgacgcttatgcactaattggagat
gtcgctggccttgctgagaagatacaaagtttctttatgcaggaggttctatctgaaacc
cactcagcgctgaagactactgtacaagaggatctggataacaacaatgtgcccagttct
aggctcacgtatagtgatctgtgcactcagatacctgaatccaagttcaggcaatgtttg
ctagcaacattagctgtactttttaggttgatgtgttcatatcatgcaatacagagcttc
cagcccgaggataaggaagatatttcgtcaccaagcactgagagagcacaaactttagcc
tctgttgaagacccatcaactacttctgttgcttcatctgacactgccatgcacggttca
tccaacataaattatagggttgaagaggcaagggatgatggaagtacagcatcaagcagc
ggatccccctggtttcagctcaggaaagatgctacgacctttgtttcacatacattactt
agaggtcgaaagaatctttggcaacttacaacaagtcgtgcagctgtcttgctttcttca
ccggctattcattcatctagcatccatcaattcttaataacttatgaagatttaaacatt
tttgtactggctggggaagccttttgtggaagtgaagcagttgagttcaggcagaaagtg
aaatctgtttgtgaaagttatttagctgctttccatcggcaaaatatacatgctctcaag
atggtgctggaaagggagcattggctgatattgccgccagagacaatcgaagtagtaagc
ttcgctgggcttgtcggtgatggagcagctttgatagtttcatctgagacctctccgaat
actcgattgctgcaagtacgcaagcctgtacatcctatccaaactaaatcctctaagagg
aatggattttcaagttggcttaagggtggaaatccatttctgccaaaactaaatggtagt
tcgagggaatacttggagtcttgtttgcctaatggatctgcaatgcaagaaagtggaaac
tccaatgaagattctttggataagagttctttgagaaacagtgatgtaattcatgtcaat
gggaatactaatttatcagaagatgaaaatgaagatcttcatgctgattttattgatgaa
gatagccaactacctagccggatttctaaacctggtcattcaagaagtcgttcttcacat
tggagcaatgaacaaataaaagagcaaacaggatcatcacttagcctcctgaggtcattg
gataaatatgcaaggttgatgcagaagttagagattgttaatgttgagttttttaaggga
ttttgccaattgtttgggatcttctttcacttcgtctttgagaccttcggtcagcaaagt
attcatccaagtggaaaggctgtgactgacacgctgtcgcatagactgaagactgcatta
ttacgaataacacacgattgtgaccaatggatgaaaccccagtctcaatcattttcttcc
tcttctccctcaagctcaagtacatcatttcctcacatggatgtcactcctaccagccca
cgtagttacttaactggtgcatccctgggactgaaggaaagatgtgcaggtgctgacact
atatatgttgttgctcggttattacatagatctaaagcgcatcttcagtcaatgcttcag
aataatgcagcactggttgaggatttctatgtgcatttggtggatgctgtaccggacctt
gttgatcatattcatagaacaactgctagattacttctccacataaatgggtatgttgat
cggattgccaatgctaaatgggaagtgaaagagcttggagtagagcacaatggatatgta
gatcttttgcttggagaatttaagcattataaaacaaggcttgctcatggaggaattcgg
aaggaggtccaagacctcctcttagaatacggagtagataatgttgctgaaattctcgtt
gaaggcctatctagggtgaagaggtgtactgatgaaggacgagctcttatgtcattagat
cttcaggtattgataaatggcttgaagcatttcatttctgtagacgtgagacctaaacta
cagatagttgaaacattcatcaaggcctactatcttccagaaaccgaatttgtgcactgg
tcacgtgctcatccggaatacagtaaaagtcagattgttggtctaatcaacctagtctct
acaatgaaaggctggaagaggaaaaccaggttggaaatattggaaaagatcgagtga
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