Solanum stenotomum: 125844584
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Entry
125844584 CDS
T08385
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125844584
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125844584
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
125844584
NCBI-ProteinID:
XP_049379854
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All DBs
Position
11:complement(6676215..6681953)
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AA seq
838 aa
AA seq
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MYLTDTSHKVMLCLDYSDKLTNLLFKSIPLLCNTSLIQSSMSTVLRPPSSPLRHHHGGRR
HHRHHLLPSSPFFLPLKPLSLSPSISLYTPYSSSSTSPQQLLLDSQETQVDFDNWDPISA
SGVAESFNFDDSFDSVELKKFETPAVEVRELEDIPDQWRRARLAWLCKELPAHKTPTMVR
ILNAQRKWIRQEDGTFVALHCMRIRENEAAFRVYKWMMQQHWFRFDFALTTKLADYLGKE
RKHLKCREIFDDIINQGRVPCESTFHILIIAYLSSSGPSVLDEACNIYNRMVHLGGYKPR
LNLHNSLFKALLGKASSESKHFLKQAEFIYQNLTSSGLEIHKDIFGGLIWLHSYQDVVDM
ERIAALRAEMRSRGIKESKEVIVSVLRACSKDGNVEEAERTWSKLLSIDGSPPSQAFVYR
MEVYAKIGEPTKSLKVYRRMQEQLGSTSVAAYHKIIKVLSKYQKLDLADSIMSEFINSGM
KQLVPSFIDLMRMYSVAGLHEKLESTFLRYREVCHPNLTVFNIYLELLVNTGNLSLAEEI
FHEMRGNGAIGVDSRACNSILRGYMTSGEYVKAVKIYNLMRQKKYDVEIESSLMERLDYV
LSLREKVVEEPIRLKLTPEQREVLTGLLLGGVQIRSDGERSLHAIHYEFNEESRIHSIFK
RHIHDEFHEWLGSHDTMVDSTADIPNSFTTISHSYFTFYADQFWPNGRPCIPKLIHRWLS
PRVLAYWYMYGGYRTSSGDILLRVKGSSEGVVSILKALKAKSLDCRVKKRGRVFWIGFLG
DNATFFWKVVEPFILDELKELLKAGGDSNGSLETQCINFDSGSETDEKNSECSDADTS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaactgatacatcgcataaagtgatgctatgtttggactactccgacaagctt
accaatctactcttcaagtccattcctctgttatgtaatacttcccttatccaatcctcc
atgtccaccgtcctccgccctccctcctccccactccgccaccaccacggcggccgccgg
catcatcgccaccacctcttaccttcatcaccctttttccttcccctaaaacccctttca
ctgtctccctcaatatccctttacaccccctattcttcatcttccacttcaccccaacaa
cttctgctggattcccaagaaacccaagttgatttcgacaattgggaccccatttctgct
tctggggttgctgaaagtttcaattttgacgattcttttgattctgtggagttgaagaag
tttgaaaccccagctgttgaggtgagggaattagaggacattcctgatcaatggcgtagg
gcaagattagcttggctttgtaaagagcttcctgctcataagacgcctactatggttagg
attttgaatgcacaaaggaagtggattaggcaagaagatgggacttttgttgctcttcat
tgtatgcgaattcgcgaaaatgaagctgcttttagggtttacaaatggatgatgcagcaa
cattggtttcgatttgatttcgcactaactacgaagctagcagattacttggggaaggaa
cgaaagcacttgaagtgccgggagatttttgatgacataattaatcagggacgagtgcct
tgtgaatctacattccatattctcattattgcctatcttagttcatctggaccatcagtg
ttagatgaagcctgtaacatctacaatcgcatggtgcacttgggaggttataagcctcgg
cttaacttacacaattctctgtttaaagctcttttgggaaaggcatcgagtgagagtaaa
cactttctgaaacaggctgaatttatatatcagaacttgacttcctctggattggaaata
cacaaagatattttcggcggtcttatatggcttcacagttatcaagatgtggtcgatatg
gaaagaattgctgcactaagagcagaaatgcgatcaagaggaattaaagagagcaaagag
gtaattgtgtcagttttaagagcttgctcgaaggatgggaatgtggaggaagccgaacga
acttggtcaaaacttctctccatcgatggcagtcctccttctcaagcttttgtctatcgt
atggaagtatatgcaaagattggagaacctacaaaatctttgaaagtatataggaggatg
caggaacaactgggttccacctccgttgcagcataccataaaataataaaggtgttgtct
aaatatcaaaaactagaccttgcagattctatcatgtccgagttcataaacagtggtatg
aaacagctggtcccatcattcatcgatttgatgaggatgtactccgttgcaggtttacat
gagaaactggaatctacctttctccggtaccgtgaagtctgccatccgaatctgacagtt
tttaacatttatttggaattgttggtgaatactggcaatctgagcctggctgaagaaatc
ttccatgaaatgcgtggtaatggggcaattggtgttgattctcgtgcttgcaacagtatt
ttgagaggctatatgacctctggagagtatgtgaaggcagtaaagatatacaatttgatg
cgccaaaagaaatatgacgttgagattgaatcttcattgatggaaagacttgattatgtt
cttagcttgcgggagaaagtagttgaagaacctattaggctgaagctcacaccagaacaa
cgagaggttttgacggggttgcttcttgggggtgtgcaaattagatcagatggagagaga
agtttgcatgcaatccattatgaatttaatgaagagtcgaggatccattccatttttaag
agacacatacatgatgaatttcacgagtggttaggctctcatgatacgatggtggatagc
actgctgacattcctaattcttttaccaccatttcgcattcttattttactttctatgct
gatcagttctggcccaatggacgcccttgtataccaaaactcatacatagatggttgtca
cctcgcgttcttgcttattggtatatgtatggtggttaccggacatcatctggtgatatt
ctattgagagtaaagggaagttcagagggtgttgtgagtattcttaaagcactgaaagcc
aaatcattagactgccgagtaaaaaagagggggagagtcttttggataggatttctgggg
gacaatgctacattcttctggaaggtggtagagcccttcattcttgatgaattaaaggaa
ctccttaaagcaggtggcgactcaaatggatccctggaaacccaatgtatcaattttgac
agtggctcggagactgacgagaagaattcagagtgtagcgatgctgacacgtcatag
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