Solanum stenotomum: 125844616
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Entry
125844616 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125844616
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125844616
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125844616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
125844616
NCBI-ProteinID:
XP_049379887
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All DBs
Position
11:complement(39984330..39995890)
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AA seq
828 aa
AA seq
DB search
MGKVKGKHRLDKYYHLAKEQGYRSRAAWKLIQLDSKFSFLRSSQSVLDLCAAPGGWMQVA
VKHVPVGSLVIGVDLDPIRPIRGAISVQQDITTPKCRSTIKKLMAENGCRAFDLVLHDGS
PNVGGAWAKEATSQNSLVIDSVKLATELLAPKGTFITKIFRSQDYNAVLYCLRQLFEKVE
VDKPLASRSASAEIYIIGFKYKAPSKIDPRLLDVKHLFQGGKEPPKVIDVLGATKQKRHR
DGYEDGATVLRKVCSVADFVWSDNPVQVLGTFSSMSFDDPACLAIRYHTLTTEEVKSLCD
DLRVLAKQDFKYLLKWRMQIRKALSPEKIKTPTVVESESKEGEDEGEDEEERVLNEIEEK
TNILEKKQKKEKKLQAKRRAKEKARKALGIQVDATEDGYGDQDLFSLSSIKGKKDLVAVD
NSEYDKETTEVSDESDEEAQEHSSSDLDSEDERRRHDDNIEALFDEAYERYLGRVEGKSK
QRKRSKQAHLKDDLQDGNDDSTMIDSAQDSESDMEDNEVNPLVVPLEDAPPQEEIVKKWF
TQDVFAEAKEQDVLDRYDSEDEMQIDGGAKIQKSKELTNDKQQGETKDLTRKKTNLQVSA
SRTDDDFEIVPAPATDSSDSSSDESDDDIDTKAEILATAKMMLKKRPRDEMIDDAYNRYM
FHDEGLPKWFIDEEKRNFQPVKPVTKEEIAAMRAQFKAIDARPAKKVAEAKARKKRAAHR
KLEKFRKKANTISDQTEISEGSKRKMIEQLYRKASSTKKPEREYVVAKKGVQVKVGKGKV
LVDPRMKKDARKHGMKKKKQQDKGKKGNQKGKGSGKASAAGNKGGRGK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtgaaaggaaaacatcgtttggacaagtactatcatcttgccaaagaacaa
ggttatcgttctagggcagcatggaagcttatccaactcgattccaagttcagttttcta
cgttcatcacaatcagtacttgatctttgtgcagcacctggtggttggatgcaagtggct
gttaagcatgtacccgttggtagtcttgttatcggtgttgatttggatccaattaggcca
attcgtggtgctatttctgttcaacaggatatcactacacctaaatgtcgttcaactatt
aagaaacttatggctgagaatggatgtagagcttttgatttggttcttcatgatggttca
cctaatgttggtggtgcttgggctaaagaagctactagtcagaattcattggttattgat
tcggttaagcttgctactgaattgttggctccaaaagggacctttattacaaagattttc
agatctcaagattataatgcagttctttactgtctaagacagctttttgaaaaagttgag
gtggacaaacctctggctagtcgttcagcatctgctgaaatttatattataggttttaaa
tataaagctccttcaaagatcgatccacgacttcttgatgtaaagcacctctttcaagga
ggaaaagaaccccccaaggtgattgatgtactcggggcgacgaagcagaagagacaccgt
gatgggtacgaagatggagccacagtcctaaggaaggtgtgctcagttgcagattttgta
tggtctgataaccctgttcaggtccttggtacattttcttcaatgagttttgatgatcct
gcctgtttggccattagataccacactctcacaacagaggaggttaaatctctatgtgat
gatttacgtgttcttgcaaagcaagacttcaagtatctgttaaagtggcgtatgcagata
agaaaagctttatctcctgaaaaaataaagaccccaacagttgttgaaagtgagagcaaa
gaaggtgaagatgaaggtgaagatgaagaagaaagagttctcaatgaaatagaggagaaa
accaatattttggagaaaaagcagaaaaaagagaagaaacttcaagcaaaaagacgagcc
aaggagaaagcacgcaaggcacttgggatacaagtagatgcgacagaggatggctatggt
gatcaggatttgttctctctatcttccatcaagggtaagaaagatctcgtagctgttgat
aacagtgaatacgacaaagaaactactgaggtaagtgatgaaagtgacgaggaagcccag
gagcattcatccagtgatctggactctgaagacgaacgcagaagacatgatgacaatata
gaggcattatttgatgaggcttatgaacggtatttgggtagagtggaaggtaaatcaaaa
cagagaaagcgatccaaacaagcacacttgaaggatgatctgcaggatggcaatgatgat
agcacgatgattgattctgctcaagactctgagagtgacatggaagataatgaagtcaac
cctcttgttgtgccccttgaggatgcaccacctcaggaggagattgtgaagaagtggttt
actcaagatgtttttgctgaagcaaaagagcaagatgtcttggacaggtatgacagtgaa
gatgaaatgcaaatagatggaggggctaagatccaaaaatctaaggaattgacaaatgat
aaacagcagggagagactaaggatctgacgaggaaaaaaacaaatttacaggtctcagct
tctaggacagatgatgattttgagattgttcctgctcctgctactgattctagtgactca
tcatctgatgaatctgatgacgacattgacaccaaggctgaaatattggctacagcaaaa
atgatgctgaagaaaaggcctagggatgaaatgattgatgatgcttacaacagatatatg
tttcacgatgaggggttgccgaagtggttcattgatgaggaaaagagaaatttccagcca
gtgaaacccgtgacaaaagaggagattgctgcaatgagagctcaatttaaagcaattgat
gctcggcctgcaaagaaggttgcagaagccaaagctcgtaagaaacgggccgcgcataga
aagctagagaagtttaggaagaaagctaacacgatatcagaccaaactgaaatctctgaa
ggttcaaagagaaaaatgattgaacagctatacaggaaggcgtcgtcaacaaaaaaacca
gaaagggaatatgtagtggcaaagaaaggagttcaagttaaggttggcaagggaaaggtc
cttgttgatccaagaatgaaaaaagatgcaagaaagcatggaatgaaaaagaagaagcag
caggacaaggggaagaagggcaaccaaaaaggaaaaggctcaggaaaggcttcagcagct
ggcaacaagggaggccggggaaaatga
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