Solanum stenotomum: 125844637
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Entry
125844637 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125844637
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125844637
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125844637
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Pol_alpha_B_N
Motif
Other DBs
NCBI-GeneID:
125844637
NCBI-ProteinID:
XP_049379906
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Position
11:complement(56719901..56739491)
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AA seq
562 aa
AA seq
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MGDDAFDGPQLAEKLSKLNSSQQSIESLSRWCISYRKKAKQIVETWDKSFRSAQREQRVS
FLYLANDIIQNSRRRGSEFVNEFWKVLPASLKQVYETGDESGKKVASRLVDIWEERKVFG
SRGQNLKDEVLGKSPAPSVSNGKSSNPIKVVKKDAHSVRIKMAVGCTPEKIVTAFQLVHD
ENVNEEDALNKCKHSVFRVGEMENDIENRSSQGNLQGSELMDKLLEQENILQQCIGHFEN
AESLRITLISLLKDALQDQESKLELLRSGMQVACGQIELVKNARRRLTSPSVAAPPVNTG
ILPIEVTRTTEPTPPSVQLINMPTLPPPPNPVTSFTNSKTNEEESKRSAAAAVAAKLAAS
TSSAQMLTSVLSSLVAEEAASLSSGLKSTGFTSSLPFASPEKRLKLDKPMTFSDMKSSER
GSSTYFTSSQQLITSIPLAPSSAMQSVSQPNQIQAPFPPPPPPPPSLHPANSPASQLVQS
TAMMMGVMPYGYSAGLQQPLSSQIAMGLRPPPPPQQAQQQQQLQTQQPQSQQQPANGGFY
RPPGIGFYGQAHQQTAPAAPRQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgatgcttttgatggcccgcaattggcagaaaagttgtccaagcttaacagt
tcacaacaaagcatagaatctttatcacgatggtgcatttcatatcgtaagaaagccaag
cagattgttgaaacatgggataaatcattcagatctgcacagcgggagcaacgtgtttcg
tttctgtacttagccaatgatattatccaaaatagtcggcgcaggggtagtgagtttgtc
aatgagttctggaaggtccttcctgcgtctctgaagcaggtttatgaaactggtgatgaa
agtgggaagaaagtggcttctagactggttgatatatgggaagagagaaaagtatttgga
tccaggggtcagaatcttaaagatgaagtgttgggcaagagtcctgctccttcagtaagc
aacgggaagagctcaaatcctatcaaagttgtgaagaaggatgctcactcagtaaggatt
aaaatggctgttggctgtactccagaaaaaattgtaacagcattccaactagttcatgat
gaaaatgtgaatgaggaagatgctttgaacaagtgtaaacattctgtttttcgcgttggg
gaaatggagaatgatattgaaaaccgttcttcccaaggaaatctccagggttctgaattg
atggataaattgctagaacaggaaaatatacttcaacaatgcatcggccactttgagaat
gctgaatcattgagaattaccttgatttctctgctgaaagatgcacttcaagatcaagaa
tctaagctagagcttttacgcagtgggatgcaggttgcgtgtggtcagattgaactagta
aaaaatgcaaggaggaggctgacatctcccagtgttgctgctccaccagtgaatactggt
atccttccaattgaagtcaccagaacaactgaaccaaccccgccttcagtgcaattaatc
aacatgccaactctgcctccacctcccaatcctgtgacttctttcacaaattctaaaact
aatgaagaggaaagcaaaaggtcggcagcagcagctgttgctgcaaaacttgctgcttca
acatcttctgctcaaatgttaacctctgttctttcatcccttgttgctgaagaagctgca
tcactgagcagtggattgaaatcaactggcttcacgtctagcttgccttttgcatcccca
gagaaacggctcaagttagataagccaatgactttttctgatatgaaaagttctgaaagg
ggtagctccacttactttacttcatcacaacaattgattactagcattcctcttgcccca
tcctcggccatgcaatctgtgtcccagccaaaccagatacaagctccgtttccacctcct
ccccctccccctccatcattacatccagcaaattcccctgcaagtcagttagttcaatct
acagctatgatgatgggggtgatgccatatggatatagtgctggccttcaacaacctcta
tcttctcaaattgcaatgggactgaggcctcctccaccaccccagcaagcacagcagcag
cagcaactgcagactcagcagccacaatctcagcagcagcctgccaacggtggattttac
cgtcctcctggtattggattctatggacaggcccatcagcagacggcgccagcagcacca
cggcagtag
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