KEGG   Solanum stenotomum: 125844821
Entry
125844821         CDS       T08385                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
sstn  Solanum stenotomum
Pathway
sstn03083  Polycomb repressive complex
sstn04120  Ubiquitin mediated proteolysis
sstn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125844821
   04120 Ubiquitin mediated proteolysis
    125844821
  09126 Chromosome
   03083 Polycomb repressive complex
    125844821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sstn04131]
    125844821
   04121 Ubiquitin system [BR:sstn04121]
    125844821
   03036 Chromosome and associated proteins [BR:sstn03036]
    125844821
Membrane trafficking [BR:sstn04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    125844821
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     125844821
   Cul7 complex
     125844821
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     125844821
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     125844821
SSDB
Motif
Pfam: Skp1_POZ Skp1 BTB_KLHL33 EFL1
Other DBs
NCBI-GeneID: 125844821
NCBI-ProteinID: XP_049380119
LinkDB
Position
11:52410047..52411533
AA seq 180 aa
MAESEDTKKMLTLKSNDDKEFEVEEAAIIQSEMIKNMIEDGCATGVIPLPNIDSKTLTKV
IEYLNKHITKDEDEDEDEADDKGKAVETGEEDDLKEFDEQFVSVDWEELFDIIMAANYLN
IHELMELCCQSAADRLKNKSVRAVREMLKITNDLTEEEEKEIINDAPWAFEGPEIDDTVN
NT seq 543 nt   +upstreamnt  +downstreamnt
atggcagaatctgaagacacaaagaaaatgttgacattaaaatcaaacgacgataaagaa
tttgaagttgaagaagcagcaattattcaatcggaaatgattaaaaatatgatcgaagat
ggatgtgctacgggtgtaattccattaccaaatatcgatagtaaaacgttaactaaagta
attgagtatctgaataagcacattactaaggatgaggacgaggatgaggacgaagccgat
gataaaggaaaggctgtggaaacaggtgaggaagacgatctcaaggagttcgatgagcaa
ttcgtgagtgtggattgggaagagctcttcgatatcataatggctgcgaattatttgaac
attcacgagttgatggagttgtgttgccaatctgcagctgataggctgaagaacaagagt
gttagagctgttcgcgagatgttaaagattacgaatgatcttactgaggaagaagagaaa
gagattatcaacgatgctccgtgggcatttgaaggtcctgagattgatgataccgttaac
tag

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