Solanum stenotomum: 125844854
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Entry
125844854 CDS
T08385
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125844854
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125844854
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DUF6170
DUF4399
Motif
Other DBs
NCBI-GeneID:
125844854
NCBI-ProteinID:
XP_049380171
LinkDB
All DBs
Position
1:17898703..17911832
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AA seq
822 aa
AA seq
DB search
MMRSQNSKDFIEMGLGKTLQAISLLSYLKVYLKTPGPFLVLCPLSVTDGWMSEMANFAPK
LRVLSYTGEKEHRRNLRRKIYECMNREASDAKSLPFDVLLTTYDIVLLDEDFLSQVPWCY
AIIDEAQRLKNPSSVLYNVLKERFVIPRKLLMTGTPIQNNLSELWALLHFCMPSVFGTLE
QFLSAFKEAGDPSCPDADKAKEQFKILKYVIGAFMLRRTKSQLIELGTLVLPPLTEITVM
APLVALQKKVYMSILRKELTQLLALASGAPNTRSLQNIVIQLRKACSHPYLFAGIEPEPY
EEGEHLVQASGKLLILDHLLQKLHACGHRVLLFSQMTQTLDVLQDYLELRKYSYERLDGS
IRAEERFAAIRSFSHNRSKFEAEQNAAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQV
DKQALQRAHRIGQTNHVLSINLVTEQSVEEVIMRRAQRKLQLSHNIVGDDVLDQEGKEMA
GAEAGDLRSVMLGLHMLDPAEVTNEESDKFDRNELTAMAETIMAFRNEERSARDDKFEVK
PANFLNEFNVVTKRGPESIKLDHLLDETSYLEWVEKFKEASQINHNPIFELGNRRSLPEE
KHLKAEAAKKKAEEEKLSKWETLGYHSLSVKDPVSAPDTDISSDSGAVHFVYGDCTCPSK
VSPSEPTIIFSCVDTSGNWGHGGMFDALARLSTSVPAAYERASEFGDLHLGDLHLIEITE
DLAKGGDSPHAPQWVALAVVQSYNPRRKVPRGSVSIPDLERCLSKASYSAAQKSASIHMP
RIGYQDGSDRSEWYTIERLLRKYAALHGINIFVYYFRRASQS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggagtcaaaactcaaaagattttattgagatgggattggggaagactttgcaa
gctatatcattgctgagctaccttaaagtctatctgaagactcctggaccattcttggta
ctctgtcctcttagcgtgacggatggttggatgtctgaaatggccaattttgccccaaaa
ttgagagtgctatcctatactggagaaaaggagcatcggcgcaacttacgtaggaagata
tatgagtgtatgaacagggaggcgtctgatgcaaaatcactaccttttgatgtgctttta
actacttacgacatagtattacttgatgaagattttctatcccaagttccatggtgttat
gcaataattgacgaagcacagaggctcaagaatccatctagtgtcctgtataatgtgctc
aaagagcgttttgttattccaaggaaattgctgatgactggcacacccatccaaaacaac
ctttcagagctttgggctcttttgcacttttgtatgccttcagtttttggaacactggag
cagttcctctctgcattcaaggaagctggagatccatcatgtcctgatgcagacaaagct
aaggaacaattcaaaattttgaaatatgtaataggggcgtttatgctccgacgaactaaa
tctcagcttatcgagttggggactcttgtgctgcctcctcttactgagattactgtgatg
gcaccactggtggccctgcaaaagaaggtatatatgtccatactaaggaaggagctaact
cagctgctagcacttgcttctggagcacccaatactcggtcgttgcagaatattgtaatt
caactacgaaaagcatgtagtcatccttacctttttgctggtatagaaccggaaccatat
gaagaaggagaacacctagttcaggctagcggcaaactgctaatattggatcatcttctt
caaaaacttcatgcttgtggacatagggttcttcttttctctcagatgactcaaacactt
gatgtactgcaggattatctggaattgaggaagtattcttatgagcgtcttgatggttca
attcgtgcggaagagcgctttgctgcaatcaggagctttagtcataatagatcaaagttt
gaagctgaacaaaatgcagcatttgttttcttgatttcaacaagagctggcggagttggg
ttgaatcttgtggctgctgatacagtcatattttacgagcaagattggaatcctcaggta
gacaagcaggccttgcagcgtgctcaccgaattggtcaaacaaaccacgtgttatctata
aatttagtcacagagcagtcagtggaggaggtcatcatgcgtagagctcaacggaagtta
cagcttagccacaacattgtaggagatgatgtcttggatcaggaagggaaagagatggca
ggagctgaagctggtgacttgcgatctgttatgcttggcttgcatatgctagatcctgca
gaagtaaccaatgaagaatcagataaatttgataggaatgaattgactgcaatggcagaa
acaattatggcatttcgcaatgaagaacgttcagctagagatgacaagtttgaggttaag
ccagctaacttcttaaatgagtttaatgtggttacgaaaaggggtccagagtctattaag
cttgatcaccttcttgatgaaacttcatatctcgagtgggttgagaaattcaaggaagca
tcacagatcaaccataatccaattttcgagctgggaaacaggcgaagcttgcctgaagaa
aaacatctaaaagctgaagctgcaaagaaaaaggcagaggaggagaaattgtcaaaatgg
gagactcttggataccactccttatcggtcaaagatcctgtatcagctcctgatactgat
atctcctctgattctggagctgtccactttgtttacggggactgcacctgtccttctaaa
gtgtctccatcagagccgaccatcatattcagctgtgttgatacatcaggaaactggggt
catgggggtatgtttgatgcattggcaagactgtcaactagtgtacctgcagcatatgag
cgagcgtctgaatttggtgatcttcatctaggcgatctccatcttatagagatcacagag
gatctagctaagggcggtgattcacctcatgctcctcaatgggtagctttggctgttgtg
cagtcatacaaccctaggcgcaaagtcccacgtggcagtgtctccatccccgacttggag
agatgtctgtcaaaggcatcgtattcagctgctcagaagtccgcatcaatccacatgcca
agaatcggttatcaggatggttctgacaggtcagaatggtatacaattgaacgtctgctg
cggaagtatgctgctctccatggcataaatatttttgtgtattatttccgacgtgcatct
cagagctaa
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