Solanum stenotomum: 125844860
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Entry
125844860 CDS
T08385
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125844860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125844860
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
125844860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_2
TIP49
AAA_14
AAA_16
AAA_22
AAA_28
RNA_helicase
AAA_17
AAA_33
nSTAND3
IstB_IS21
Vps4_C
Rad17
NPHP3_N
AAA_18
Mg_chelatase
Viral_helicase1
Parvo_NS1
AAA_11
NACHT
Bac_DnaA
Cytidylate_kin2
AAA_3
ABC_tran
NB-ARC
DUF5906
Nucleolin_bd
AAA_7
BRX
Motif
Other DBs
NCBI-GeneID:
125844860
NCBI-ProteinID:
XP_049380173
LinkDB
All DBs
Position
11:45184231..45190672
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AA seq
773 aa
AA seq
DB search
MPKRGRSGGRGPLSVKLRRRIVSCKNNCIADEELVDHLRKSFRADYYNLQLQPFTSQVQN
ILQLINPPIKKPKTDSTEQILDGDGELSTLASISESDDSYSCGEKPDLMQIMLRNTYNQK
ANSIPKSKKIEYDASSISKSIFFEYDVIHDSNEDGKGKKIDVVKRDLSKLLGIGDSDRNG
GTMFKDLGGMDEVLEELKMDIMVPLYHPQATRYLGIRPVSGVLFHGPPGCGKTKLAHAIA
NEAGVPFYKLSATELVSGVSGASEENIRELFLKAHRTAPSIVFIDEIDAIASKRENVQRE
MERRIVTQLMTCMDESHRPVKPDDNAKGTTLPTDKKNTEAESDDEPGYVLVIGATNRPDA
IDPALRRPGRFDREYALGIPDENARMQILSVLTRNLRVEGAFDLMKIATSTPGFVGADLA
SLINKAGNLVLKRIMDARKVELSRESVDGEDAEEWWRKPLSPEEKEKLSINMADFEEAAK
LVQPSSRREGFSVIPNVKWEDVGGLDPLRHEFERYIIRRIKNPKDYMGFGVDLETGFLLY
GPPGCGKTLIAKAVANEAGANFIHIKGPEVLNKFVGQSELNIRTIFNNARTCSPCIVFFD
EMDSLTTERDKEETGTVERILTQLLTELDGGEERKGVYVIGATNRPNVMDKALLRPGRLG
RLLYVPLPTPDQRVLILKALARKKPIDSSVDLVSIGRDNACKRLSGADLSSLMNEAAMLA
LEDNLAAIDTGCGDTSSTIKESHFKRALKKISPSVSKEQIKYYKDFRKDFRAA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagagaggacgcagcggcggtagggggccactttccgtcaagcttcgccggcgt
attgtatcctgtaagaacaattgcatcgccgatgaagaactcgttgatcacctccgtaaa
tcttttcgggcggactattataacttacagctacagccgttcaccagtcaggttcaaaat
attctccaattgattaaccctccgataaagaagccaaaaacagacagtactgagcagatt
ttggatggagatggagaattatcgactctagcgagcatctctgaaagtgatgactcttac
tcttgcggagaaaagcccgatttaatgcagattatgcttcgaaatacttataatcagaag
gcaaatagtattcccaagtcaaaaaaaattgaatacgatgcaagtagcatttccaagtca
atattttttgaatacgatgtgattcatgatagcaatgaggatggaaaggggaagaagatt
gatgtggtgaaaagggatttgtcgaagctactagggattggtgatagtgataggaatggt
gggacaatgtttaaagatttgggcggaatggatgaggtgttggaggaattgaagatggat
attatggttccactgtaccatcctcaggcgacaaggtatctcggaattaggcctgtgtca
ggagtacttttccatggaccacccgggtgtgggaaaacaaagctagctcatgctattgca
aatgaggctggagttccattctacaaactttctgctactgagttggtctctggagtttca
ggtgcatcagaagagaacataagggaactgttcttaaaagcacacaggacggcaccatct
attgtgtttattgatgagattgatgcaattgcttccaaaagagaaaatgtacagagagaa
atggagcggcgcatagtaacacagctgatgacatgcatggatgagtcacatagacctgta
aaacctgatgataatgcaaagggaactactttacctactgataaaaaaaatactgaagca
gaatcagatgatgaacctggttatgtcctagtaattggggccaccaatagacctgatgct
attgacccagcattgaggaggccaggaagatttgaccgtgaatacgccttgggtattcca
gatgaaaatgcaaggatgcagattttgtctgtgcttactcgtaacctaagagttgaaggt
gcatttgatctcatgaagatagctacatcaaccccaggatttgttggagcagacttggct
tctctaattaataaagcaggtaacttggtactgaagagaataatggatgcgaggaaggtt
gagctttcaagagaatcggtagatggtgaagatgccgaagaatggtggagaaagccattg
tcaccggaagagaaagaaaagctcagcattaacatggctgattttgaggaggcagctaaa
ttggttcaaccctcatctagaagagaaggtttctccgttatcccaaatgtaaagtgggaa
gatgttggaggccttgatccattaagacatgaatttgagcgttacattatcaggcgtata
aagaatcctaaagattacatgggttttggagtggacttggaaacaggattcttgctttat
ggtcccccaggatgcggtaaaacattaattgccaaggctgttgctaatgaagctggagca
aattttatacacattaagggacctgaggttctgaacaagtttgttggtcaaagtgagcta
aatattcggacaatatttaacaatgcaagaacatgttctccatgcattgtattttttgat
gagatggattcattgacaactgagcgtgataaggaagaaactgggaccgttgaaaggatt
ttgactcagctactaacagaactagatggtggtgaagagagaaaaggtgtttatgtgatt
ggtgccacaaataggcctaatgtcatggataaagctcttcttcgacctggaaggttaggg
agactcctatatgtccctctacctactccagatcagcgtgtactgattttaaaagctctt
gcccggaaaaaacctatagattctagtgtcgacttggtgtccattggaagagacaatgcc
tgtaaaagattaagtggagcagacctatcctcactgatgaatgaagctgcaatgcttgca
cttgaagataatttggcagccatagatacaggttgtggtgacacatcatcgactatcaag
gagtcacatttcaaacgggctttgaagaaaatttctccgtctgtctccaaggagcaaata
aaatactataaggattttagaaaagatttcagagcagcataa
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