Solanum stenotomum: 125844916
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Entry
125844916 CDS
T08385
Name
(RefSeq) long chain base biosynthesis protein 1-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00600
Sphingolipid metabolism
sstn01100
Metabolic pathways
Module
sstn_M00094
Ceramide biosynthesis
sstn_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125844916
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sstn01007
]
125844916
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
125844916
Amino acid related enzymes [BR:
sstn01007
]
Aminotransferase (transaminase)
Class II
125844916
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
125844916
NCBI-ProteinID:
XP_049380238
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Position
11:40999967..41006515
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AA seq
486 aa
AA seq
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MDTTISVLTNKLRDASDWVTWISEAPFARAVVFGVNIGGHLFVEGLLLVVILFLLSQKSY
KPPKRPLTKKEIDELCEEWVPEPLIPTITDEMKSEPPVLESAAGPHTTVNGKEVINFTSA
NYLGLLGNEKLLEACTRALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSY
GLSTMFSAIPAFCKKGDVIVADEGVHWGIQNGLQLSRSTIIYFKHNDMESLRNTLEKITQ
ENKLAKKLRRYIIVEAVYQNSGQIAPLDEIIKLKEKYRFRVLLDESNSLGVLGSSGKGLT
EYYNVPVDKIDIITAAMGHALATEGGFCTGSTRVIEHQRLSSSGYVFSASLPPYLASAAV
KAFDILEENPDLITKLRENINILFKGLQDIHGMEIMSDPLSPIVFLRLKKSTGSSKSDLK
LLEDIADRVLKEDSVFVVTSKRSTLDKCKLPVGLRLFVSAGHSESDLEKASKSLKRVAAS
LLTDQS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggatacaacaatatcagttcttacaaataagctgagagatgcatccgattgggtcaca
tggatatccgaggctccttttgcaagagctgtggtgtttggagttaacattggagggcat
ctatttgtggagggtcttctcctggtggtcatccttttcctactatcgcagaaaagttat
aaaccacctaaaagaccattgacaaagaaggaaatagatgaattgtgtgaggaatgggtc
ccagaacctcttattcccaccattacagatgagatgaaatcggagcctccagtacttgaa
agcgctgcaggtcctcatacaactgttaatggcaaggaagtaataaattttacttcagct
aattacctcgggttattaggaaatgaaaagttacttgaggcatgcaccagggcattggag
aaatatggtgtaggttcttgtggtcctcgtggattctatggaacaattgatgttcacctt
gattgtgaggccaggatagctaagtttcttggaactcccgattctatactctactcttat
ggactttctaccatgttcagtgcaattccagcattttgcaagaagggagatgtcattgtt
gcggatgaaggtgtccattggggaatacaaaatggacttcagctctctagaagtacaatc
atatacttcaagcacaatgatatggagtccttgagaaatacattggagaaaatcactcaa
gaaaacaagctagctaaaaaacttaggcgatatattattgttgaagcagtatatcagaat
tctggtcaaatagctccattggatgaaatcatcaaactgaaagaaaagtacagattccgg
gtattgttggatgaaagcaattccttgggtgtgcttggcagttctggtaaaggtctaaca
gagtattacaatgttccggttgacaagatagatatcattactgctgccatgggtcatgca
ttggccacagaaggaggattttgcaccgggagtacaagagtcattgaacaccagcgtctc
agtagctctggttatgtgttttctgcttctttgcctccttatctggcaagtgccgcagtc
aaagcttttgatatcttggaagaaaatcctgatcttatcacaaaattgagggaaaacata
aatatactgtttaaaggtctacaagatattcatggcatggaaataatgagcgatccactc
tctccgatagtttttctaagactcaagaagtccacaggctcttcaaagagtgacctaaaa
ctgctagaagatattgcggatcgtgtcttgaaggaagattccgtttttgttgttacttca
aagagatcaacacttgataaatgtaaattgccagttgggcttcgattgtttgtgtcagca
gggcactcagaatctgatctagagaaagctagtaaatcattgaagagagtcgcggcttca
ctattgacagatcagagctag
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