KEGG   Solanum stenotomum: 125845040
Entry
125845040         CDS       T08385                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sstn  Solanum stenotomum
Pathway
sstn03082  ATP-dependent chromatin remodeling
sstn03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125845040
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125845040
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sstn01009]
    125845040
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sstn03021]
    125845040
   03036 Chromosome and associated proteins [BR:sstn03036]
    125845040
Protein phosphatases and associated proteins [BR:sstn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125845040
Transcription machinery [BR:sstn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125845040
    SWI/SNF complex
     125845040
Chromosome and associated proteins [BR:sstn03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    125845040
   PBAF complex
    125845040
   SWI/SNF complex
    125845040
SSDB
Motif
Pfam: SNF5
Other DBs
NCBI-GeneID: 125845040
NCBI-ProteinID: XP_049380395
LinkDB
Position
11:43223213..43237325
AA seq 241 aa
MKPQSASSSLKNPVKFRMPTAENLVPIRLDIEIDGQRFKDAFTWNPNDPDSEVVVFAKRT
VKDLKLPPAFVTQIAQSIQSQLTEFRSYEGQDMHTGEKVVPIKLDLRVNHTVIKDHFFWD
MNNFESDPEEFARTFCEDMKIEDPEVGPAIAIAVREQLYEIAKQSVASARESRANKKGRR
GMEHPSASKVGLPALDLGKLFSIKSSVVRKKRDADAYEPIVDHLSNEEVDALEAKEERLA
R
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaaaccccaatctgcatcttcttcactgaagaacccagtgaagtttagaatgccaaca
gctgagaatcttgttcctatccgtctcgacatcgaaattgatggccaaagatttaaagat
gcttttacttggaaccctaatgatcctgactcagaggtggtggtgtttgcgaagagaact
gtgaaggatttgaaacttcctcctgcttttgtcactcagattgctcaatccattcagtca
cagttgacagaatttcggtcatacgaaggacaagatatgcacactggcgagaaagttgtt
cctatcaagcttgatctccgagtaaatcacacagttatcaaggaccattttttctgggac
atgaacaattttgagagtgatcctgaagaatttgcacgaacattttgtgaagatatgaaa
attgaagacccagaagttggacctgcaattgccatagcagttagagaacaactttatgag
attgcaaagcaaagtgttgcatccgcgagagaaagcagggctaataagaaaggacgcaga
ggaatggaacatccctctgccagtaaagtaggtttgcctgcattggacctggggaagcta
ttcagcataaaatcaagtgttgtccggaagaagagggacgctgatgcatatgaaccaatt
gtcgatcacctgtcaaatgaagaggtggatgccctcgaggctaaggaagagaggcttgct
cggtga

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