Solanum stenotomum: 125845071
Help
Entry
125845071 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125845071
KO
K23325
transducin beta-like protein 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sstn03012
]
125845071
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125845071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Ge1_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR41
DUF6556
Beta-prop_EIPR1
WD_LRWD1
Pep3_Vps18
Beta-prop_DCAF12
DUF4834
Beta-prop_VPS8
UPF0242
Chordopox_A13L
DUF7899
Motif
Other DBs
NCBI-GeneID:
125845071
NCBI-ProteinID:
XP_049380451
LinkDB
All DBs
Position
1:complement(17049353..17059775)
Genome browser
AA seq
441 aa
AA seq
DB search
MDSMLTIAILSAIIGIVIAFLVLGNYFQKRKSEVESVAKPETIQTNQKTSKPQHSHKNTS
KKSQAKSHSHTADHKDANKRHHPLDLNTLKGHGDIVTGVCFLPNAQSLATACADGVVRIF
KLDDALSKSFKFLRINLPAGGHPIAVAVADEASSVAVACHALFGSSLYMYGEEKPKADAD
SKQAKLPLPQIKWEQHKVHDKRAILTLVGTKATYGTADGSTIIVSCSEGTDIVLFHGKSG
KIVGNVDTNQLKNNMATISPNGRFIAAAAFTADVKVWEIVYSKDGAVKEVSRIMELKGHK
SAVTWLCFSPNSEQIITASKDGTIRMWNINVRYHLSEDPKTLKVFPIPLKDAGGTTLHYD
RLCVSPDGKILATTHGSMMQWLCMETGKVLETAEKAHDGDITDMAWSPSPIPMGDKQVLV
LATASVDKKVKLWAAPSLNAS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatgcttacgattgcgattctgtcggcgatcatcggaattgtgattgctttt
ctagttttggggaactatttccaaaagaggaaatcggaagttgaatctgtcgccaagccg
gagacaattcaaacgaatcagaagacttcaaagcctcagcattctcacaaaaatacttcg
aagaaatcgcaagctaaatcacattctcacaccgccgatcataaggatgcaaacaaaagg
catcacccactggacttgaatactctaaagggtcatggggatattgtcacaggagtttgc
ttcttacccaatgcacagtctttggcaactgcttgtgctgacggcgttgttaggatcttc
aagttggatgatgctttgagcaaaagctttaagtttctgagaattaatttgcctgctgga
ggtcatccgattgcagttgcagttgctgatgaagcttcctcggttgcagtggcatgccat
gctctttttggttcttccttgtacatgtatggtgaagagaaacctaaagcagatgctgat
tccaaacaggccaagcttcctcttccacaaatcaaatgggaacagcataaagttcatgac
aagagagcaatcctaactctagttggtaccaaggcaacttatggtactgctgatgggagt
accatcattgtttcatgttctgaaggtactgatattgtgctttttcacggaaaaagtggc
aagattgttggaaacgtcgatactaatcaactcaaaaacaacatggctactatatctccc
aatggacgttttatagctgccgcagcttttaccgctgatgtcaaggtttgggagattgtg
tactcgaaggatggtgctgtaaaggaggtttcaaggattatggagctcaaggggcataag
agtgcagtgacgtggctatgctttagcccgaattctgaacaaataatcactgcatcgaag
gatggtaccatcagaatgtggaatattaatgtgcgctatcacctttctgaggaccctaag
acattaaaggtgttccctattccccttaaggatgcaggtggtacaactttacactatgat
cgtttatgtgtatctcctgatggaaagatattggccaccactcatggttcaatgatgcaa
tggctatgtatggagactgggaaggttctggaaacagctgaaaaagcacatgatggtgat
atcactgacatggcatggtcgccttctccgattccaatgggtgacaagcaagttctggtg
ttggccacagccagtgtcgataagaaagtgaagttgtgggcagctccatccctgaatgca
tcatga
DBGET
integrated database retrieval system