Solanum stenotomum: 125845140
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Entry
125845140 CDS
T08385
Name
(RefSeq) THO complex subunit 7A-like
KO
K13176
THO complex subunit 7
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125845140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125845140
03041 Spliceosome [BR:
sstn03041
]
125845140
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125845140
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125845140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
SAB
Viral_DNA_bp
Het-C
MG280
DUF6231
SlyX
DUF4094
Motif
Other DBs
NCBI-GeneID:
125845140
NCBI-ProteinID:
XP_049380529
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All DBs
Position
11:1430382..1435194
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AA seq
247 aa
AA seq
DB search
MSIKGRKFAGKGEAVASHYAFGPLEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTTFALE
IEKEADNYNDCERLAKAFLQELNTFEIPLLKSKVVIDANVREKENFNDLKGEINKQIVQA
QADIEDLKRQLEESKVERKHKEEGEAIRKLIAMQPPRSETQKVITELEKEIAMLEAENTA
SSRTLDLRKKQFALLLHVVDELQNTIEEEQRNLVEEMRNVVDDHNKSGLEDATMGPEAMA
VDYQVNP
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaaaggtaggaaatttgctggaaagggggaggcagtggcatcacattatgca
tttggcccacttgaagacgatataattattaagcatagacttctgactcggacaaccacc
accagaggtgaaccaccactgaagaaacttcagaagaagttcactacttttgctttggaa
atagagaaggaagctgataactacaatgattgtgaaagacttgccaaagcattcttgcaa
gagctaaatacttttgagattccgctcctaaagagcaaagtagtcatagatgcgaatgtt
agagaaaaggagaattttaatgacctgaagggtgaaatcaacaagcaaattgtacaggct
caggctgacatagaagatctcaagaggcaactcgaagaaagcaaggttgaaaggaagcac
aaagaagagggtgaggctatcaggaagttgattgctatgcagcctccaagatcagaaact
cagaaggttataacagagcttgagaaagagatagctatgttggaagcagagaatactgct
agttcgaggacattggaccttcgtaaaaagcagtttgcccttttattgcatgtggttgat
gagttgcagaacacaatagaggaagagcaaaggaatttggtcgaagagatgaggaatgta
gttgatgatcataacaagagtggattggaggatgctaccatgggtcctgaagcaatggct
gttgattaccaagtgaatccttag
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integrated database retrieval system
