Solanum stenotomum: 125845217
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Entry
125845217 CDS
T08385
Name
(RefSeq) polyadenylate-binding protein 2-like isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125845217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125845217
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125845217
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_DEAH11
RRM_7
HDV_ag
DUF4140
VapE-like_dom
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
125845217
NCBI-ProteinID:
XP_049380633
LinkDB
All DBs
Position
11:complement(53257010..53262901)
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AA seq
219 aa
AA seq
DB search
MDEEEHEVYGGEIPIEGDMEPHGADVDMATADDDAVKELDEMKKRLKEMEDEAAALREMQ
AKVEKEMGSVQADPASTAASQENREEVDSRSIFVGNVDYACTPEEVQQHFQACGTVNRVT
ILTDKFGQPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPGRFN
PYLGGYRSRRPYAAPIFYSPYGYGKVPRFRRPGRFMSYY
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagagcatgaagtttatggtggtgaaatccccattgaaggtgacatggaa
cctcacggtgctgacgtggacatggccaccgccgatgatgacgctgttaaggaattggat
gagatgaagaagagattgaaggagatggaagatgaagctgcagctcttagggagatgcag
gctaaggttgagaaggagatgggttctgttcaagcagatcctgcaagtacagctgcttca
caggaaaaccgggaggaagttgattcaagatcaatatttgttggcaatgttgactatgca
tgcactccagaggaagttcagcagcatttccaggcatgtggtactgtcaatcgggttacc
attcttactgataaatttggccaacccaaaggttttgcatatgtggaattcattgaacaa
gaagctatccaggaggcactccagctgaatgagtctgaactgcatggacgtcagttgaag
gtaatgcccaagaggactaatgttccagggatgaagcaattccgcccagggcgcttcaat
ccatacttaggaggttacagatctagaaggccttatgcagcccccattttctactctcca
tatggatacggaaaagttccaaggttcaggaggcctgggagattcatgtcttactattaa
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