Solanum stenotomum: 125845265
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Entry
125845265 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125845265 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125845265
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125845265
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125845265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
125845265
NCBI-ProteinID:
XP_049380696
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Position
11:complement(35593555..35856245)
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AA seq
185 aa
AA seq
DB search
MDGPPENDVCSICHGPFHVPCQANCSHWFCASCILQVWDHGSALQACKCPLCRRPITLLV
PSESASRLHQDPEVPEVLRRVEQYNRHFGQHANGLLQRMQDLPFLLRRLLRDMTDPQRSL
PFVMRARVYLAVFISGIYVLSPVDLIPEGFLGIIGLLDDLIIMFICFLHVAALYRSVLLF
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggatggacctccggagaatgatgtttgttctatctgccatggccctttccatgtccct
tgtcaagctaattgttcccattggttttgcgctagctgtattctacaagtttgggatcat
ggatcagcccttcaagcatgtaaatgtccattatgccgtcgtccgattaccttgttggtt
cctagtgagtctgcatcaaggttgcatcaagatcctgaagttcctgaggtgttacggaga
gttgagcaatataaccgccattttggtcaacatgccaatggccttctccagagaatgcaa
gatcttccatttctcctccgaagattactgcgagatatgacagatcctcaaagatctctt
ccgtttgtcatgagggcgcgtgtctatttggcagtttttataagtggtatatacgtcctt
agccccgtggatcttatcccagaagggtttttgggtataataggtttactagatgatctg
attatcatgttcatctgtttccttcatgttgctgctctgtatagatcagttcttctgttt
cggcatggaggttcttaa
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