Solanum stenotomum: 125845355
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Entry
125845355 CDS
T08385
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125845355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125845355
03012 Translation factors [BR:
sstn03012
]
125845355
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125845355
Translation factors [BR:
sstn03012
]
Eukaryotic type
Release factors
125845355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
125845355
NCBI-ProteinID:
XP_049380809
LinkDB
All DBs
Position
11:50001636..50005809
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AA seq
437 aa
AA seq
DB search
MADGQENDKNIEIWKMKKLIKALESARGNGTSMISLIIPPGDQISRITKMLAEEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIMTEDGKEKKVTFDLTPFKPIN
ASLYLCDNKFHTGPLGELLESDEKFGFIVMDGNGTLFGTLSGNTREILHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFSQAIELSAEILSNVKFIQEKRLIGKFFEEISQDTG
KYVFGVDDTIKALEMGAVETLIVWENLDINRYVLKNSVTNEIVIKHLNKDQEADQSNFKD
PENSAELEVQDKMPLLEWFANEYKTFGCSLEFVTNRSQEGSQFCRGFGGIGGILRYQLDM
RLFDEPSDEGEYFEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggccaagaaaatgacaagaatattgaaatatggaaaatgaaaaagttaatc
aaagcccttgaatctgcaagaggaaatggtaccagtatgatctctcttattattcctcct
ggtgatcagatatctaggattaccaagatgttggcggaagaatatggtactgcatcaaat
attaagagtagagtaaatcgtcagtctgtccttggtgcaataacgtctgcccagcagagg
cttaaactgtataataaggtacctccgaatggtttggtcctttatactggaactataatg
actgaagatgggaaggaaaagaaggtaacctttgaccttacaccttttaagcccattaat
gcgtctctatacctctgtgacaacaagtttcacacgggacctctgggtgagcttttggaa
tcagatgagaagtttggtttcatcgtcatggatggtaatggtactctttttgggacatta
agtggaaacactagggaaatccttcataaattcactgttgaccttcccaagaagcatgga
agaggaggtcaatcagctctgcgatttgctcgtcttcgaatggagaaacgccataactat
gtgaggaagacagcagagcttgctactcagttcttcattaatccagccactagtcagcca
aatgtatctggactaatacttgctgggtcagctgatttcaagacagagctaagccagtct
gatatgtttgatccacgtcttcaggcaaagatacttaatgtggttgatgtgtcctatggt
ggggagaatggattcagtcaggccattgagctatctgctgagattctctccaatgtgaag
ttcatacaagagaagcgcttgataggaaaattctttgaggaaatcagtcaagatactgga
aagtatgtatttggtgtggatgacacaataaaagctctggagatgggagctgttgaaact
cttattgtttgggaaaatcttgatataaaccgttatgtgctgaaaaatagtgttaccaat
gagattgtcattaagcacctaaacaaggaccaagaggctgatcaaagcaacttcaaggat
cctgagaattcagctgaattggaggtccaggacaaaatgccgctattggagtggttcgcc
aatgagtacaaaacctttggttgttcacttgagtttgtcactaacaggtctcaagagggg
tcacagttctgccgaggatttggtggcattgggggcatccttcgttaccagcttgacatg
cgtttgtttgatgagccatctgatgaaggggaatattttgaggattctgattaa
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