Solanum stenotomum: 125845396
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Entry
125845396 CDS
T08385
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125845396
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125845396
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
AAA_15
AAA_28
MMR_HSR1
RsgA_GTPase
AAA_22
VapE-like_dom
AAA
DUF5906
AAA_27
Dynamin_N
RecG_N
Motif
Other DBs
NCBI-GeneID:
125845396
NCBI-ProteinID:
XP_049380852
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Position
11:complement(5435106..5439162)
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AA seq
601 aa
AA seq
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MVSDAAKKRDAQKKAAAAARRGGKGAAASKSAATASKSAGESNGVDNLTNGVGDLQISDR
TCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAI
GLRELPIPDHMDIFHLSREIEASDMTSLEAVINCDEERLQLEKEAEALAAQDDGGGEQLE
RIYERLEAMDAATAEKRAAEILFGLGFDKKMQAKKTRDFSGGWRMRIALARALFMNPTIL
LLDEPTNHLDLEACVWLEESLKNFERILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNY
DQYVQTRSELEENQMKQYKWEQEQISAMKEYIARFGHGSAKLARQAQSKEKTLAKMERGG
LTEKVGRDSVLVFRFTDVGKLPPPVLQFSEVAFGYTPDNLIYKNLDFGVDLDSRIALVGP
NGAGKSTLLKLMIGELFPTDGMVKRHNHLKIAQYHQHLTEKLDMEVSALLYMMREYPGNE
EEKMRAAIGRFGLTGKAQVMAMKNLSDGQRSRVIFAWLAFRQPHMLLLDEPTNHLDIETI
DSLAEALNAWDGGMVLVSHDFRLINQVAHEIWVCENQAVTRWEGGIMEFKKHLKKRAGLG
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggatgcggcgaagaagagagatgcgcagaagaaggcggcagcagctgctagg
agaggaggtaaaggtgcggcagcgtctaaatcggctgcgacggcgtctaaatcggcgggg
gaaagtaacggggttgataatttgacgaatggagtaggggatctacagatatctgatcgg
acttgtacgggtgttttgtgttcacatccgctatcgagggatattcggatagaatcatta
tcagtcactttccacggacatgatctaatcgttgattctgaactggagctcaactatggc
agacgttatggtttgttgggattgaatggttgcgggaagtctactcttcttaccgctata
gggttgagggaacttcccatcccagaccacatggatatttttcatctttctcgggagatt
gaagcctctgacatgacctctctcgaggccgtcattaattgtgatgaagagaggttgcaa
ttggagaaagaagctgaagctttggctgcacaggatgatggtggtggagagcaacttgaa
cggatctatgagcgtttagaagctatggatgctgccactgctgagaaacgtgctgctgaa
atcttgtttgggcttggatttgataagaaaatgcaagcaaagaaaacacgcgatttttct
ggtggctggagaatgaggattgctcttgcccgtgccctctttatgaatccaacaattttg
ttgcttgatgagccaacaaaccatcttgacctagaagcctgtgtgtggttagaagaatcc
ttgaagaactttgagcgcattctggttgtcatttcacactcacaggattttctcaatggt
gtgtgtaccaatatcatccacatgcaaaacaagaagttgaaactctatacaggtaactat
gaccaatatgtgcaaacccgttcagagctggaagagaaccagatgaaacagtacaagtgg
gagcaggagcagatttctgcaatgaaggaatacattgctcgctttgggcacggttcagct
aaactagcccgtcaagcacagagtaaagagaagacattggctaagatggagcgtggtggg
cttactgagaaggtggggagggacagcgtcctggttttccggtttactgatgtcggcaaa
cttcctcctccagttctacagttttctgaagttgcttttggctacacacctgataacctc
atctacaagaaccttgattttggtgtagatctcgactccaggatagcacttgtagggcct
aatggagctggaaagagcacactacttaagctgatgataggggagttatttcccactgat
ggcatggttaagcggcataatcacctaaaaattgcacagtaccaccagcacttgactgag
aagctagacatggaggtgtcagctcttttgtacatgatgagagagtaccctgggaatgag
gaggagaagatgagggcagcaattgggaggtttggactcacaggtaaagctcaagtaatg
gctatgaagaacttgtcagatggtcaacgtagtcgggtgatatttgcatggttggctttt
agacaaccccacatgctgctgttggatgagccaaccaaccatcttgatattgagaccatt
gactcacttgcagaggccttgaacgcatgggatggtgggatggttctagtgagtcacgac
tttaggctcataaatcaggtggcccatgagatatgggtatgtgaaaatcaggctgtgaca
cgatgggagggtggcatcatggagttcaagaaacacttgaagaaaagggctggattgggt
gattaa
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