Solanum stenotomum: 125845445
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Entry
125845445 CDS
T08385
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
sstn04141
Protein processing in endoplasmic reticulum
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125845445
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125845445
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125845445
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125845445
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125845445
03009 Ribosome biogenesis [BR:
sstn03009
]
125845445
03110 Chaperones and folding catalysts [BR:
sstn03110
]
125845445
04131 Membrane trafficking [BR:
sstn04131
]
125845445
03051 Proteasome [BR:
sstn03051
]
125845445
03029 Mitochondrial biogenesis [BR:
sstn03029
]
125845445
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125845445
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
125845445
Spliceosome [BR:
sstn03041
]
Complex B
Other components
Prp19 complex
125845445
Complex C
Prp19-CDC5 complex
125845445
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125845445
Chaperones and folding catalysts [BR:
sstn03110
]
Heat shock proteins
HSP70 / DNAK
125845445
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
125845445
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
125845445
Proteasome [BR:
sstn03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
125845445
Mitochondrial biogenesis [BR:
sstn03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
125845445
Exosome [BR:
sstn04147
]
Exosomal proteins
Proteins found in most exosomes
125845445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
DACNG
Motif
Other DBs
NCBI-GeneID:
125845445
NCBI-ProteinID:
XP_049380910
LinkDB
All DBs
Position
11:complement(7813553..7816248)
Genome browser
AA seq
649 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFSDASVQSDIKLWPFKVTPGPGDKPMIVVNYKGEEKQFSA
EEISSMVLIKMKEIAEAFLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAERYKAEDEEHKK
KVEAKNALENYAYNMRNTIKDDKISSKLSAEDKKKIEDAIDQAISWLDSNQLAEADEFED
KMKELESLCNPIIAKMYQGAGGEAGAPMDDDDAPPAGSTGAGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaaggtgaaggtccggcgatcggtatagatctaggaactacttactcttgc
gtcggagtttggcagcatgatcgtgttgagattattgccaatgaccaagggaacaggacg
actccttcttacgttggttttactgattctgagcgtctcattggtgatgctgctaagaat
caagtcgccatgaatcctattaacactgtgtttgatgccaaacgtcttattggaaggagg
ttcagtgatgcctctgtacagagtgacatcaaattgtggccttttaaggttactcctgga
cctggtgacaagccaatgattgtggttaactacaagggagaagagaaacagttttctgct
gaagaaatctcttccatggttcttattaagatgaaggaaattgctgaggccttccttggg
tcaacagtgaaaaatgctgtggttactgttcctgcatacttcaatgactcacaacgtcag
gctactaaggacgctggtgtcatatctggcttgaatgtcatgcgtattattaatgagccc
acagcagctgccattgcatatggtcttgacaaaaaggccactagtgttggtgagaagaat
gttcttatctttgatcttggtggtggtaccttcgatgtgtccctcctcactattgaagag
ggtatctttgaggtgaaagccacagcaggagacactcaccttggtggtgaagattttgat
aacagaatggtgaaccactttgtccaggaatttaaaagaaagcacaagaaggatatcacc
ggtaacccaagggcccttagaagattgaggacagcttgtgaaagagcgaagagaactctt
tcctccactgcccagacaacaatcgaaattgattccctatatgagggagttgacttctat
tcaaccatcactcgtgccagatttgaggagttgaacatggatcttttcaggaagtgtatg
gagcctgttgagaagtgtttgagggatgccaagatggacaagagcactgtccatgatgtt
gttcttgttggtggttccaccagaattcccaaggtacaacagctgttgcaagacttcttt
aatgggaaggagctttgcaagagtatcaacccagatgaggctgttgcctatggtgctgct
gttcaagctgccattctgagtggagagggtaatgagaaggtacaagacttgttgcttttg
gatgtcacccctctatctcttgggttggaaactgctggaggagtcatgactgtcttgatt
ccaaggaatacgaccattcctaccaagaaagagcaggtgttctctacctattctgacaac
cagcctggagtgttgattcaggtttatgagggtgagagagcaaggaccagagacaacaac
ttgttgggtaaatttgagctctctggtattcctcctgctcctaggggtgtacctcagatc
acagtctgctttgacattgatgccaatggcatcttgaacgtttcagctgaagacaagacg
actggacagaagaacaagatcactattaccaatgacaagggtaggttatcaaaggaagaa
attgagaagatggtccaggaagcagagaggtacaaggcagaggatgaggagcacaagaaa
aaggtggaggccaagaatgcacttgagaactatgcctacaacatgaggaacactataaag
gatgataagattagttctaagcttagcgcagaagacaagaaaaagattgaggatgccatt
gatcaggcaatttcatggcttgatagcaaccagcttgctgaagctgatgagtttgaagat
aagatgaaggaactggagagcctatgcaatcccataattgctaagatgtaccagggtgct
ggtggtgaggcaggtgcaccgatggatgatgatgatgctcctccagctggttctaccggt
gcaggccccaagattgaggaggtcgattaa
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