Solanum stenotomum: 125845529
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Entry
125845529 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125845529 isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sstn03016
]
125845529
Enzymes [BR:
sstn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
125845529
Transfer RNA biogenesis [BR:
sstn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
125845529
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
125845529
NCBI-ProteinID:
XP_049381010
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Position
11:complement(38298970..38307585)
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AA seq
622 aa
AA seq
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MEDIEDLLVGNGAGVPPGFRLPVPTAVGVNPKQRKKNGVTKLTVVQDSPAPKIPGTQTIY
IKTFGCSHNQSDSEYMAGQLSAFGYALSDNPDEADLWMINTCTVKSPSQSAMDTIISKGR
SAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPAL
DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKNVIADGVREIW
LSSEDTGAYGRDIGVNLPILLNAIVAELPLNGSTMLRIGMTNPPYILEHLKEIADVLCHP
CVYSFLHVPVQSGSDSILSAMNREYTVGEFRKVVDTLMELVPGMQIATDIICGFPGETDE
DFAQTVDLIKDYKLAQVHISQFYPRPGTPAARMKKVPSNVVKQRSRELTAVFESFTPYTG
VEGKVERIWITDIASDGIHLVGHTKGYIQVLVIGPESMMGSSAMVKITSVGRWSVFGEVI
EILCQNNEDVPSHRSFDERCSPCALSEEACACSKEQEPCSATSDCCNQSPTREATTLLKN
DPNQDDLSSRNLIGWFLRNRKNQSSKKMDLTSSESKEKQIQDLSHRSAWSLVDIALLSGI
LLSLFTIVALFLNLGSRSLSSK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaagacattgaagatttgctggtgggtaacggggccggagtacctccagggttccgg
ttaccggtgccgacggccgttggagtcaatccaaagcaaaggaaaaagaacggtgtaacg
aagctaacagtagtccaagactctcctgcacctaaaatacctggcactcagactatttac
atcaagacattcggatgttctcataatcagagtgattccgaatatatggctggtcagctt
tcagcgtttggttatgctctgagtgataaccctgatgaggcagacctatggatgataaat
acatgcacagtcaaatctcctagtcagtctgcgatggatactattataagtaaaggaaga
agtgcaaaaaagccattggtagtagcaggttgtgttcctcaaggaagccgtaatctgaaa
gagctggaaggagttagtatagtaggagttcagcagattgaccgtgtggttgaggttgtg
gaagagactttgaaaggtcacgaagttcggctactaacccggaagacattaccagcactt
gatcttccaaaggtccgaaagaacaagtttgttgagattcttccaataaatgttggttgt
ttaggtgcttgtacttattgcaagacgaagcatgcccgtggtcatttaggaagttacaca
gttgacagccttgtgggccgagtcaaaaatgtcattgctgatggagtgagggagatctgg
ctgagtagtgaagacaccggggcatatggtcgtgacattggagttaatcttcctattcta
ctgaatgctatagttgcagagcttcctttgaatggaagtacaatgctccgaattgggatg
accaatcctccttatattcttgagcacttgaaggaaatagctgatgtcttatgtcatcca
tgtgtgtattcttttcttcatgtgccagttcagtcgggtagtgattcaatcttgagtgca
atgaaccgtgaatacactgtgggtgagttcaggaaagtggtggatacattaatggaactg
gtccctgggatgcagattgcaacagatataatttgtggatttcctggtgaaactgatgaa
gattttgctcagacagttgaccttattaaggactacaagcttgctcaagttcatatatca
cagttctatcctaggcccggcactcctgctgcaaggatgaagaaggttcctagtaatgtg
gtgaagcaacgtagtcgtgaattaactgctgtatttgagtcctttactccatatactgga
gtggaaggcaaagtagagaggatatggattactgacatagcttcagatgggattcatttg
gtgggacacactaagggatacattcaggtcctggtgattggtccagaaagcatgatgggt
tcctccgctatggtgaaaataacatccgtaggtagatggtcagtctttggagaagtgatt
gagatcctctgccaaaataacgaggatgttccctcacacaggagttttgatgaaaggtgc
tccccatgcgccctttcagaagaagcttgtgcctgttcaaaagagcaagaaccttgctct
gcaacatctgattgctgcaatcaaagtccaactcgggaagcaacaacactgctgaagaat
gaccctaatcaagatgatcttagcagcagaaacttaattggatggtttctgaggaatcgt
aagaatcagtcttccaaaaagatggacttaactagctcagagtctaaggagaagcagata
caggatttaagtcaccgaagcgcttggagtcttgttgatatagctctacttagtggaata
ttattgagcttgttcacaatagtagctctatttttgaatcttggatcaaggagtttgtca
tccaagtaa
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