Solanum stenotomum: 125846046
Help
Entry
125846046 CDS
T08385
Name
(RefSeq) probable disease resistance protein At4g27220
KO
K13459
disease resistance protein RPS2
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125846046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_RPS2
LRR_8
LRR_4
LRR_14
WHD_DRP
LRR_EndoS
AAA_22
LRR_R13L1-DRL21
LRR_Zer-1
AAA_18
KAP_NTPase
AAA_14
nSTAND6
LRR_9
SRP54
AAA
AAA_16
AAA_13
ABC_tran
ATPase_2
nSTAND3
NPHP3_N
NACHT
LuxT_C
MeaB
AAA_5
TniB
LRR_LRWD1
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
125846046
NCBI-ProteinID:
XP_049381464
LinkDB
All DBs
Position
11:51718513..51721207
Genome browser
AA seq
837 aa
AA seq
DB search
MEARESFFPTKLFGQETKRTCERIWRCLKKDKVITSIGIYGVKGVGKTTLAKLINHLVEQ
NTKSQVIWINVSQQCNIKVLQNDIAKSLGFDLIEEHDEEKRAIALHESFKEKNDFVLVLD
DVLENVPLKMLGNPLKIEGGRLIVTSCLLETCRKMGCQREFRVKTLEAEESWSLFIEKLG
NEMIIPLEVEGIAKFMVNNCTKGLPFGIVTLATKLRELELSNVDEWRKAFEESFKEENSD
VMKMLLYSFNSLKDEKLQQCFLYCCLYPEDEKISKDHLITRFVLEGLIDEQESCEAEFEE
GYEILNRLEGVCLLESGVNSVKMHSLIRDMALKITNENPMFMVKAGVQLNDAPKQDEWIE
NLDKVSLMRNKIAEIPEGTSAKCPRLTTLMLQQNYHLWKIPDSFFEHMKSLRVLDLSHTC
IEKLPDSVSELENLTALLLAFCWNLRSIPTLAKLESLQELDLSGTGIQTLPESLEALLSL
KCLSMYAMRWLERIPIGILPQLSTLQRLVLSHHIDVQGEELEVLNELEEFQGRFSTIHDF
NRFIRAQENEGCLVFYRILVGDYDGLGQMTQIEFNHGRISDKLVKCYGLGKEDEVLLLPQ
DIQHLKIESCNNFSTCLSDFLSCLYDSKDLKYFKVRWCNKLEYLMKVKQGQESVLFPSLE
HLDLFELPSFVGIFDESETSLSPSIPLVGTFSLLRMIRIERCHNIKKLLPIDLCSNLRHL
ERIYVLSCSQIEEIIEDQANDGIAVFPKMTRITLWSLPQLKSICNGKMKCNSIKKVSIKE
CVKLRNLPLFFSHEEELKIPSTLKEITINSSEKDWWESLEWDHSTTKIELQPFLNYF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagggagtcattttttccaacaaagttatttggtcaagaaacaaaaagaaca
tgtgaaagaatttggagatgtttaaagaaagacaaagttattacaagtattggtatatat
ggagttaaaggtgttggaaaaacaaccttagccaaactcatcaatcaccttgttgaacaa
aatactaaatcccaagttatttggattaatgtttctcaacaatgtaacatcaaagtgtta
caaaatgacattgctaaatcacttggatttgatcttatagaggaacatgatgaagaaaag
agggcaatcgcgttacacgaatcgttcaaagagaaaaatgattttgttttagtactagat
gatgtgttagagaatgtacctttgaaaatgttaggtaatcctctaaaaattgaaggtgga
aggttgatagtaacaagttgtttactcgaaacatgtcgaaaaatgggatgtcagagggaa
ttcagagtaaaaacacttgaagcagaggagtcctggagtttgttcatagaaaaactcgga
aatgagatgattattccgctagaagttgaaggaatcgcgaagtttatggtgaataattgt
actaaaggacttccatttgggattgttacattagctacaaagttaagagagttggaattg
agtaatgttgatgaatggagaaaggcgttcgaagaatcatttaaagaggagaacagtgat
gttatgaagatgttgttatatagttttaattcattgaaggatgaaaagttacaacaatgt
ttcttgtactgttgtttgtatccagaagatgagaaaatctcgaaagatcatttgataact
cgatttgttttagagggactaatcgatgaacaagagagttgcgaggcagaatttgaagag
ggatatgaaatattgaacagattggaaggtgtttgtttgttggaaagtggcgtaaatagt
gtgaaaatgcatagtttgattagagatatggcattgaagatcactaatgaaaatcctatg
tttatggttaaagctggagttcagcttaatgatgcaccaaaacaggatgaatggatcgaa
aatttggacaaggtatctctaatgaggaacaagatagctgaaataccagaaggaacatca
gctaagtgtcctaggctaacaacattgatgttgcagcagaattatcacttatggaagatt
ccagattctttcttcgagcacatgaagtcgttacgtgttcttgatttaagccacacttgc
attgagaagttgcctgattcagtatctgagttggagaatctcaccgcgctcttacttgca
ttttgttggaacctaaggtcaattccaactctggcaaagctcgagtcattgcaagagttg
gacttgagtggcactgggattcagactttgcctgaatcccttgaggctctattgagcctc
aaatgcctgagtatgtatgcaatgcgttggcttgagaggataccaataggtatattgccc
caactctcaactctgcaacgtctagtgttatcgcatcatatagacgttcaaggtgaggaa
ctagaggtgttaaacgagttggaagagtttcaaggtaggttctctactattcatgacttc
aaccggttcatcagagctcaagaaaatgaaggatgcctcgtgttttacagaattctagta
ggtgactatgatggtttaggacaaatgacacaaattgaattcaatcatggaagaatttcg
gataaattagtcaagtgttatggacttggaaaagaagatgaagtactattgcttccacaa
gacattcaacacttgaaaattgagagttgcaacaactttagtacttgtctttccgacttc
ttgtcatgtctatacgattcaaaagatttaaagtacttcaaagttcgttggtgcaacaaa
ctagagtaccttatgaaggtaaaacaaggacaagaatccgtcttattcccctctctcgag
catcttgatctctttgaattgcctagtttcgttggtatttttgatgaaagtgaaacaagt
ttgagtccttcgattcctcttgttggtactttttccctccttagaatgatacgtatcgaa
agatgtcacaacatcaagaagctacttccaattgatctatgctcaaacctgagacatctc
gagaggatatatgtcctatcatgtagtcaaatagaagaaataattgaagatcaagcaaat
gatggaatcgccgtctttcctaaaatgacaagaataaccttatggtctttgccacaattg
aaaagcatatgcaatggaaaaatgaagtgcaattcaatcaagaaagtgtcaataaaggaa
tgtgttaagttaaggaatttgcctttgtttttttcacatgaagaggaactcaaaattcct
tctacacttaaagagattactataaattcaagtgaaaaagattggtgggaatctttggaa
tgggatcattcaactacaaaaattgaacttcaaccttttcttaactatttctaa
DBGET
integrated database retrieval system
