Solanum stenotomum: 125846253
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Entry
125846253 CDS
T08385
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125846253
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125846253
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125846253
Protein phosphatases and associated proteins [BR:
sstn01009
]
HAD phosphatases
Fcp/Scp phosphatases
125846253
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125846253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
125846253
NCBI-ProteinID:
XP_049381587
LinkDB
All DBs
Position
12:complement(36667777..36678374)
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AA seq
953 aa
AA seq
DB search
MFKSTVVLYEGERLVGEVEIYCEKGVVWGEKVIRISHYSPSSERCPPLAVLHTVTTGLSF
KLEPTKSKPLTQDSPLTLLHSTCLRDNKTAVMPLGREELHLVAMQSKNIGGQCPCFWGFK
VASGIYDSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSESDPQRASVM
LAEVKRYQEDKIILKQYAENDQVVDNGKVIKSQSEVFPALSDNHQPIVRPLIRLQDRNII
LTRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPES
NLINSQELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDDKDQPRVHVVPA
FAPYFAPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDDIKQVPSAP
DVSNYLISEDDPSAVNGNKDSLGFDGMADSEVERRLKEAMLASTSVPSQMTNLDPRLVPA
LQYPVPPVISQPSIQGPVVPFPTQHLPQVTSVLKSSVTQISPQDTSLQSSPAREEGEVPE
SELDPDTRRRLLILQHGQDTRDQVSSEPKFPMGTPLQVSVPPRVQPHGWFPAEEEMSPRQ
LNRPLPPKEFPLNPEAMHINKYRPPHPPFLPKMETSMPSDRVLFENQRLPKEVIPRDDRM
RFSQSQPSFRPPGEEVPLGRSSSSNRVLDLEPGHYDQYLETPAGALQDIAFKCGAKVEFR
SSFLSSPELQFSLEVLFAGEKVGEGIGRTRREAQRHAAEESLMYLADKYLSCIKPDSSST
QGDGFRFPNASDNGFIDNMSPFGYQDRVSHSFASEPPRVLDPRLEVFKKSVGSVGALREL
CAIEGLGLAFQTQPQLSANPGQKSEIYAQVEIDGQVFGKGIGSTWDDAKTQAAERALVAL
KSELAQFSQKRQGSPRSLQQGFSNKRLKPEYSRGVQQRVPLSGRFPKNTSTMP
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatcgacggtggtgttgtatgaaggagaaagattggtgggagaagttgaaata
tactgtgagaagggtgtggtatggggggagaaagtaataaggatatctcactattcgccg
tcaagcgagagatgtccaccactggcagtgctacacacagttaccactggattaagcttc
aaattggaacctacaaaatcaaagccgctgacccaagactcgccgctcactcttttgcat
tccacatgtctcagagataacaagactgcagtgatgccacttggaagagaggaacttcat
ttagtcgccatgcagtctaagaatattggcggacagtgtccttgcttttggggatttaag
gttgcatcagggatttatgattcttgtctaacaatgctaaacctcaggtgtcttggcatt
gtatttgatcttgatgagacactcatagttgccaacacaatgcgttcatttgaggataga
atagaggccttgcagcggaaaataaattcagagtcagatccgcaacgtgcctctgttatg
ctggctgaggtcaagcgttatcaggaggataaaattattttaaagcaatatgccgaaaat
gatcaggttgttgacaatggaaaggtgatcaaatctcagtctgaggttttccccgcattg
tctgataatcaccaacctattgtcagacccctgattaggttgcaagatagaaacattatt
cttactcgtattaatccaatgatccgtgatactagtgttcttgtgagattgagacctgct
tgggaggatctccgaagctatctgactgcaaggggtcggaagcgctttgaagtttatgtg
tgcacaatggctgaaagagattatgctttagaaatgtggcgccttcttgatccagaatca
aacttgattaactcacaagaactcttggatcgtattgtctgtgtcaagtctggcttgagg
aaatctttgttcaatgtattccaagatggaaattgtcatcctaagatggcattggtgatt
gatgatcgcttgaaagtgtgggatgataaggatcaaccccgagtgcacgttgttcctgca
tttgctccatattttgcccctcaagctgaaggcaacaattctgttcctgtcctttgtgtt
gccagaaatgtagcctgcaatgttagaggtggttttttcaaagattttgatgaaggcctg
ttacagcgaatatctgaagttgcatatgaagatgatattaaacaagttccttctgctccc
gatgtcagcaactatttgatttcggaggatgatccttcagctgtaaacgggaataaggat
tcacttggatttgatggaatggctgatagtgaggttgaaaggagactcaaggaagcaatg
ttggcttcaacaagtgttccttctcaaatgacaaatttggatccaagacttgtaccagct
ctccagtaccctgtcccacctgttatttcacaaccaagcattcaaggcccagtggtgcct
tttcctactcaacatctccctcaagtgacttctgtacttaaatcatcagtgactcaaata
agtcctcaggatacaagcttgcaaagttctcctgctagggaagagggtgaggtaccagaa
tctgaattagatcctgatacaaggaggagattacttatattgcagcatggtcaagacacg
agagatcaagtatcaagtgaacctaagttccctatggggactccattacaagtatctgtg
ccaccacgggtgcagccacatggttggtttccggctgaggaagagatgagccctaggcaa
cttaatcgacccttacctcccaaggaatttcctttaaatccagaggctatgcatattaac
aaatatcggcctcctcatccaccttttcttcccaaaatggagacttctatgccatctgat
agagttctttttgagaaccagaggctgccaaaagaggtaatccctcgggatgacaggatg
agattttcccaatcacaacctagctttcgtccaccaggtgaggaagttcccttgggtcgg
tcatcttccagcaatagggttcttgaccttgaacctggacattatgatcaatatctagaa
acacctgctggagctttacaagatattgcattcaagtgtggagcaaaggtcgaattcaga
tcaagttttctttcgagtccagaactgcagttctccttggaggtgttgtttgcaggagaa
aaagttggagaaggaattggccggacgagaagggaagcacaacgacatgctgctgaggaa
tctcttatgtatctggccgacaaatacttgtcatgtatcaaacctgattccagttccaca
cagggtgatggatttaggtttccaaatgcaagtgataatgggtttattgacaacatgagt
ccttttgggtatcaagatcgtgtctcacattcttttgcatcagagcctcccagagtgttg
gatccaaggcttgaggtttttaagaagtcagtgggttcagttggcgccctaagagaacta
tgcgcaattgaaggacttggtttggcattccaaactcagcctcaactttcagctaatccg
ggccagaaaagtgaaatatacgcccaggtggaaattgatggccaagtatttggcaaagga
attggttcaacatgggatgatgctaaaacacaggctgctgaaagggctcttgttgctctg
aagtctgagctggctcaattttctcagaagcgccagggttctccaagatcattgcagcag
ggattttctaataaaagattgaaacctgaatattctcggggtgtgcagcagagagtacca
ttgtctggtagattcccgaagaatacttccactatgccatga
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