Solanum stenotomum: 125846282
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Entry
125846282 CDS
T08385
Name
(RefSeq) soluble starch synthase 3, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00500
Starch and sucrose metabolism
sstn01100
Metabolic pathways
sstn01110
Biosynthesis of secondary metabolites
Module
sstn_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
125846282
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sstn01003
]
125846282
Enzymes [BR:
sstn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
125846282
Glycosyltransferases [BR:
sstn01003
]
Polysaccharide
Storage polysaccharide
125846282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
DUF3592
Motif
Other DBs
NCBI-GeneID:
125846282
NCBI-ProteinID:
XP_049381617
LinkDB
All DBs
Position
12:38642592..38657700
Genome browser
AA seq
1230 aa
AA seq
DB search
MDVPFPLHRSLSCTSVSNAITHIKIKPFLGFVSHGTTSLSVHSSSWRKDGMVTGASFPFC
ANFSGRRRRKVSTPRSQGSSPKGFVPRKPSGMSTQRKVQKSNGDKESQSTSTSKESEISN
QKTVEARVETSDDDTKGVVRDHKFLEDEDEINGSTKSISMSPVRVSSQFVESEETGGDDK
DAAKLNKSKRSEESGFIIDSVIREQSGSQGETNASSKGSHAVGTKLYEILQVDVEPQQLK
ENNAGNVEYKGPVASKLLEITKASDVEHTESNEVDDLDTNSFFKSDLIEEDDPLAAGTVE
TGDSSLNLRLEMEANLRRQAIERLAEENLLQGIRLFCFPEVVKPDEDVEIFLNRGLSTLK
NESDVLIMGAFNEWRYRSFTTRLTETHLNGDWWSCKIHVPKEAYRADFVFFNGQDVYDNN
DGNDFSITVKGGMQIIDFENFLLEEKWREQEKLAKEQAERDRLAEEQRRIEAEKVEIEAD
RAQAKEEAAKKNKVLRELMVKATKTRDITWYIEPSEFKCEDKVRLYYNKSSGPLSHAKDL
WIHGGYNNWKDGLSIVKKLVRSERIDGDWWYTEVVIPDRALVLDWVFADGPPKHAIAYDN
NHRQDFHAIVPKHILEELYWVEEEHQIFKTLQEERRLREAAMRAKVEKTALLKAETKERT
MKSFLLSQKHVVYTEPLDIQAGSSVTVYYNPANTVLNGKPEIWFRCSFNRWTHRLGPLPP
QKMSPAENGTHVRATVKVPLDAYMMDFVFSEREDGGIFDNKSGMDYHIPVFGGVAKEPPM
HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLKMNNVKDFRFHKSY
FWGGTEIKVWFGKVEGLSVYFLEPQNGLFSKGCIYGCSNDGERFGFFCHAALEFLLQGGF
NPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLIGRAMTNADKATTV
SPTYSQEVSGNPVIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAAKEA
LQRKLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRVQNDFV
NLANQLHSTYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVV
RKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAWYNGRDWFNS
LCKQVMEQDWSWNRPALDYLELYHAARKLE
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggatgttccatttccactgcatagatcattgagttgcacaagtgtctccaatgcaata
acccacatcaagatcaaaccttttcttgggtttgtctctcatggaaccacaagtctatca
gtacattcttcttcatggaggaaggatggaatggttactggggcttcatttccattttgt
gcaaatttctcgggaagaagacggagaaaagtttcaactcctaggagtcaaggatcttca
cctaaggggtttgtgccaaggaagccctcagggatgagcacgcaaagaaaggttcagaag
agcaatggtgataaagaaagtcaaagtacttcaacatctaaagaatctgaaatttccaac
cagaagacggttgaagcaagagttgaaactagtgacgatgacactaaaggagtggtgagg
gaccacaagtttctggaggatgaggatgaaatcaatggttctactaaatcaataagtatg
tcacctgttcgtgtatcatctcaatttgttgaaagtgaagaaactggtggtgatgacaag
gatgctgcaaagttaaacaaatcaaagagatcggaagagagtggttttataattgattct
gtaataagagaacaaagtggatctcagggggaaactaatgccagtagcaagggaagccat
gctgtgggtacaaaactttatgagatattgcaggtggatgttgagccacaacaattgaaa
gaaaataatgctgggaatgttgaatacaaaggacctgtagcaagtaagctattggaaatt
actaaggctagtgatgtggaacacactgaaagcaatgaggttgatgacttagacactaat
agtttctttaaatcagatttaattgaagaggatgatccattagctgcaggaacagtggag
actggagattcttctctaaacttaagattggagatggaagcaaatctacgtaggcaggct
atagaaaggcttgccgaggaaaatttattgcaagggatcagattattttgttttccagag
gttgtaaaacctgatgaagatgtcgagatatttcttaacagaggtctttccactttgaag
aatgagtctgatgtcttgattatgggagcttttaatgagtggcgctataggtcttttact
acaaggctaactgagactcatctcaatggagattggtggtcttgcaagatccatgttccc
aaggaagcatacagggctgattttgtgttttttaatggacaagatgtctatgacaacaat
gatggaaatgacttcagtataactgtgaaaggtggtatgcaaatcattgactttgaaaat
ttcttgcttgaggagaaatggagagaacaggagaaacttgctaaagaacaagctgaaaga
gacagactagcagaagaacaaagacgaatagaagcagagaaagttgaaattgaagctgac
agagcacaagcaaaggaagaggctgcaaagaaaaataaagtattgcgagaattgatggta
aaagccacgaagactcgtgatatcacctggtacatagagccaagtgaatttaaatgcgag
gacaaggtcaggttatactataacaaaagttcaggtcctctctcccatgctaaggacttg
tggatccacggaggatataacaattggaaggatggtttgtctattgttaaaaagcttgtt
agatctgagagaatagatggtgattggtggtatacagaggttgttattcctgatcgggca
cttgtcttggattgggtttttgctgatggtccacccaagcatgccattgcttatgataac
aatcaccgccaagacttccatgccattgtccccaagcatattctggaggaattatattgg
gttgaggaagaacatcagatctttaagacacttcaggaggagagaaggcttagagaagcg
gctatgcgtgctaaggttgaaaaaacagcacttctgaaagctgaaacaaaggaaagaact
atgaaatcatttttactgtctcagaagcatgtagtatatactgagcctcttgatatccaa
gctggaagcagcgtcacagtttactataatcccgccaatacagtacttaatggtaaacct
gaaatttggttcagatgttcatttaatcgctggactcaccgcctgggtccattgccacct
cagaaaatgtcgcctgctgaaaatggcacccatgtcagagcaactgtgaaggttccattg
gatgcatatatgatggattttgtattttccgagagagaagatggtgggatttttgacaat
aagagcggaatggactatcacatacctgtgtttggaggagtcgctaaagaacctccaatg
catattgtccatattgctgtcgaaatggcaccaattgcaaaggtgggaggtcttggtgat
gttgttactagtctttcccgtgctgttcaagatttaaaccataatgtggatattatctta
cctaagtatgactgtttgaagatgaataatgtgaaggactttcggtttcacaaaagctac
ttttggggtgggactgaaataaaagtatggtttggaaaggtggaaggtctctcggtctat
tttttggagcctcaaaatgggttattttcgaaagggtgcatatatggttgtagcaatgat
ggtgaacgatttggtttcttctgtcacgcggctttggagtttcttctgcaaggtggattt
aatccggatatcattcattgccatgattggtctagtgctcctgttgcttggctctttaag
gaacaatatacacactatggtctaagcaaatctcgtatagtcttcacgatacataatctt
gaatttggggcagatctcattgggagagcaatgactaacgcagacaaagctacaacagtt
tcaccaacttactcacaggaggtgtctggaaaccctgtaattgcgcctcaccttcacaag
ttccatggtatagtgaatgggattgacccagatatttgggatcctttaaacgataagttc
attccgattccgtacacctcagaaaatgttgttgaaggcaaaacagcagccaaggaagct
ttgcagcgaaaacttggactgaaacaggctgaccttcctttggtaggaattatcacccgc
ttaactcaccagaaaggaatccacctcattaaacatgctatttggcgcaccttggaacgg
aacggacaggtagtcttgcttggttctgctcctgatcctagggtacaaaacgattttgtt
aatttggcaaatcaattgcactccacatataatgaccgcgcacgactctgtctaacatat
gacgagccactttctcacctgatatatgctggtgctgattttattctagttccttcaata
tttgagccatgtggactaacacaacttaccgctatgagatatggttcaattccagtcgtg
cgtaaaactggaggactttatgatactgtatttgatgttgaccatgacaaagagagagca
cagcagtgtggtcttgaaccaaatggattcagctttgatggagcagatgctggcggagtt
gattatgctctgaatagagctctctctgcttggtacaatggtcgggattggttcaactct
ttatgcaagcaggtcatggaacaagattggtcttggaaccgacctgctcttgattatttg
gagctttaccatgctgctagaaagttagaatag
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