Solanum stenotomum: 125846372
Help
Entry
125846372 CDS
T08385
Name
(RefSeq) transcription factor RAX3-like
KO
K09422
transcription factor MYB, plant
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125846372
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
125846372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
125846372
NCBI-ProteinID:
XP_049381736
LinkDB
All DBs
Position
12:44319516..44321089
Genome browser
AA seq
333 aa
AA seq
DB search
MGRAPCCDKANVKRGPWSPEEDSKLKAYIEQHGTGGNWITLPQKVGLKRCGKSCRLRWLN
YLRPNIKHGEFTDEEDNIICTLYMSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLLC
NKQRKDHRPRTGSYINHNKLEMMKEHENFLATHQTINNTYSWPSEQILFSTLIAPQNHDL
AESSSANSHNFQYSSTDQVYFSQDQLCQISSTNQLASMNLVNGNTCNSSVMISNGYYPSN
GVVINNGLQEYNNYNSVGLDHDALNSTSTTHSQQVDKSVLEMVNSSTISTTSQDQSTSWE
ELSPLVNYPSSVFETVSPYYVFEEQRYMGLLKQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgggtagagctccctgctgtgacaaagccaatgtcaagagaggaccatggtcacctgaa
gaagattcaaaactcaaggcctatattgagcaacatggaactggtggtaattggattacc
cttccccagaaagtaggtctcaagagatgtgggaagagttgtcggcttagatggctgaat
tatctccggccaaatatcaagcacggagagttcactgatgaggaagacaacataatctgt
actctctacatgagtatcggtagtaggtggtcaattattgctgcacaattacctgggcga
acggataatgatatcaagaactactggaacacgaggttgaagaaaaaactactactatgc
aataagcagcgaaaggatcatcggccacggaccggatcatacattaatcataataagcta
gagatgatgaaggaacacgaaaatttcttggctactcatcaaactatcaataatacatat
tcttggccttcagaacaaatactcttctctacactaattgcaccacaaaatcatgacctg
gcagaaagcagcagtgcaaacagccacaactttcaatattccagtactgatcaggtttat
ttctcccaagatcaattgtgtcaaattagctccaccaatcagcttgcatcgatgaatctc
gtaaatggcaatacttgtaactcttctgtgatgataagcaatggctattaccctagcaac
ggggtcgttatcaacaacggtctacaagagtataacaattacaattctgttgggctggat
catgacgcactcaatagtactagtactactcattctcaacaagtagataaaagtgttttg
gaaatggtcaatagtagcactattagtactacatcacaagatcaaagtacaagctgggaa
gaattgagtcctcttgttaattatccttcatcagtattcgaaaccgtatcaccttattat
gtatttgaagagcaaaggtacatggggttgttgaaacagtaa
DBGET
integrated database retrieval system
