Solanum stenotomum: 125846504
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Entry
125846504 CDS
T08385
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125846504
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
125846504
REST complex
125846504
Heterochromatin formation proteins
Other heterochromatin formation proteins
125846504
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
125846504
NCBI-ProteinID:
XP_049381903
LinkDB
All DBs
Position
12:48687260..48696205
Genome browser
AA seq
1348 aa
AA seq
DB search
MKRLRDDGYDSPSFKRPFGSNRGESYSPSQVPGSGPGGGGGGSSAGGAGATASNPKLTTG
DALSYLKEVKDMFQSQRDKYDMFLDVMKDFKAQRIDTVGVIERVKDLFKGHPRLILGFNT
FLPKGYEITLNDEDEAPPKKVEFEEAISFVNKIKTRFQNDDHVYKSFLDILNMYRKEHKG
IDEVYREVAVLFSDHPDLLDEFTRFLPDNSGTASAAQTSVGRPSFHRYDERSSAMPILRQ
SHMDKRFRRDRLIGPYAERDLSIERPDLDDEKTMIKLHKEQKRRAEKESRDRRTHDQDYK
EPDNENNEDLSMQRHTDKKKSARKVEEFGGPHEDKDALKNMYSQEFSFCEKVKERLRSPT
DYQAFLKCLHIYSTEIITRTELQSLVADLLGKHPDLLEGFGEFLERCEQDDGFLEGVMRK
SRWNDGHASKSVKDDGKDKEPKRETDGTKEKDRYKEKYWGKSIQELDLSNCKRCTPSYRL
LPDDYPIPTASQKSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELD
MLLESVSSTAKRVEELLNAINDNSIGGAFRVEDHFTVLNLRCIERIYGDHGLDTVDILRK
NPSHALPVILTRLKQKQEEWTKCRTDFNKVWSEIYAKNHYKSLDHRSFYFKQQDSKNLGS
KSLLAEIKEIKENKQKEDDMILSISAGSRHPITPNLEFDYTDSELHEDLYKLIKYSCEEV
CSSKEQLDKVLGLWTNFVEQILGVPCRPHDSEATENDVLLKPHGPKVDGTSIGESDGSPS
ADAITRNCKQSKVISNRDANASPLRVTLSRTSFANADALPKEDGLPVIGEHLTSSDAAPA
MGEDTVHGRVEITSGRGARQGNGASDDGQVSKSNIDNVPASESDTSRSIPLGNGGFAEGS
TINGYNDDSADPCKNEKEEGELSPNGDFEEDNFVAFRSGASHNGSVQYQTRGAEEIGSQD
AAGENDADADDEDSENVSEAEEDVSGSESAADECSREEHEEEDDGEHDELDGKAESEGEA
EGTNEAHYAGGDGNVLQMSDRVLLTSKPLTKYVASPVYEGVVKYPRVFYGNETFYVLFRL
QQILYERLLSAKLNSASSESKWRTGKDTGSIPYDRFMSALHSLLDGSAENSKFEDDCRSI
IGNQSYVLFTLDKLIYKLVKQLQTVSSDELDCKLLQLYEYERLRKPEKFVDSAYYENAHF
LLQEDSIYRFECTSSPTRLSIQLMDDRGDKSEVVAVAVDPNFAGYLHNDYLSVKHGKKES
SAVLLKRNKRKRADNDESTALCMAMEHVILVNGLECKMASNSSKISYVLDTEDFFFRQGG
KRRKVSAGRLSCAYQARVERFHRVLLSL
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattgagagatgatgggtatgatagcccttcatttaagcggccatttggttct
aaccgaggagaatcctacagtccatcacaagttccaggaagtggtccgggtggaggaggt
ggtggcagcagtgctggtggagctggtgctactgctagtaacccaaagctgacaactggt
gatgcgttgtcttatttgaaggaagtcaaggacatgtttcaaagccaaagggataagtat
gacatgttccttgacgttatgaaagactttaaagctcaaagaattgatactgttggtgtc
atagaaagagtaaaagacttgtttaaagggcatcctaggttgatccttggattcaacact
ttcttgcccaagggttatgaaataaccctcaatgatgaagatgaggctcctccaaagaaa
gttgagtttgaagaagctattagctttgtgaacaaaataaagacccgtttccaaaatgat
gatcacgtttacaaatccttcctagatattttgaacatgtataggaaggagcacaaggga
atcgatgaggtgtaccgtgaggttgccgtactttttagtgaccatccagatttgctagat
gagttcactaggttcttgccagataattcaggaactgcatcagcagcacaaacttctgtt
ggaaggccttcattccatcgttatgatgagaggagctcagctatgcccattcttaggcaa
tcacacatggacaagcgcttccggcgggataggcttattggtccttatgctgaaagagac
cttagcattgagcggcctgatttggacgacgaaaaaacaatgataaagttgcataaagag
caaaagagacgtgctgaaaaagagagcagggacagaagaactcatgatcaggattataaa
gaacctgataatgagaataatgaagatctaagcatgcagcgtcacactgataaaaagaaa
tctgctcggaaggttgaagaatttggaggacctcatgaagataaagatgccctgaaaaat
atgtatagccaagagttcagcttctgtgaaaaggtcaaggaaagactacgaagtccaact
gattatcaggctttcttaaaatgtcttcacatttatagcacagaaataattacaaggacc
gagttacaaagtttggttgctgatctgcttggaaaacatcctgatcttttggaaggtttt
ggtgaatttctagagcgttgcgaacaagatgatggatttctcgaaggtgttatgaggaag
agtaggtggaatgacgggcatgcttccaagtcagtaaaggacgatgggaaagacaaagag
ccgaagcgtgagactgatggaactaaagaaaaggaccgatacaaggagaaatactgggga
aaatccatccaagaacttgacctctcaaactgcaaacgctgcacgcccagttatcggctt
ctccctgatgattatccaatacctacagcaagccaaaaatccgagcttggagctcaggtg
ttaaatgaccattgggtttctgtgacttcagggagtgaggactactctttcaagcacatg
cgcagaaatcagtatgaagaaagcctgttccgttgtgaagatgataggtttgagctagac
atgttattggagtcggtgagttcaactgctaagcgcgtagaagagttattgaatgccatt
aacgataattcaattggcggggcattccgtgttgaggaccactttacagtcttaaactta
agatgcattgagcgaatctatggtgatcatggtctggatacggtggatattctgcgtaaa
aatccatctcatgcgctgcctgttatactgacccgcttgaagcagaaacaggaggagtgg
accaagtgtcgcacagattttaacaaagtttggtcagagatctatgctaagaaccattat
aagtcacttgaccatcgaagtttctacttcaagcaacaagattcaaagaatcttggctca
aaatccttactagcggagatcaaagaaattaaggagaacaagcagaaagaagacgacatg
attctttctatttccgctggaagtagacatcctataacaccaaatcttgaatttgattat
actgactctgagcttcatgaagacttgtacaaacttatcaagtattcgtgtgaagaggtt
tgctcctccaaagagcaattagataaagtactggggttatggaccaactttgttgagcaa
atcttgggtgttccttgtcgtcctcatgactcagaggctactgagaatgatgtcttattg
aagccgcatggcccaaaagttgatggaactagcattggtgaaagtgatggcagtcctagt
gcggatgctattactaggaattgtaaacaatcaaaagttatcagcaacagagatgctaat
gcttcccccctacgagtaactctttctaggacaagctttgcaaatgcagatgctctcccc
aaagaagatggtttgccagtgattggtgagcacctaactagttccgatgcagctcctgct
atgggagaagatactgttcatggaagagtggaaataacttcagggcgtggcgcaagacag
ggcaatggtgcttctgacgatggtcaagtatccaagtctaacatcgataatgtgccagca
tcagagagtgatacttcaagatcgattccgttgggtaatggagggtttgcagaaggctct
acaattaatgggtacaatgatgattcagctgatccctgtaaaaatgagaaagaagagggt
gagttatcaccgaatggtgattttgaagaggacaattttgttgcctttagaagtggtgcc
tcgcacaatggaagtgtgcaatatcaaaccagaggtgctgaagagattggttctcaggat
gctgctggtgaaaatgatgcagatgctgatgatgaagatagtgaaaatgtttctgaggct
gaagaagatgtttctggcagtgagtctgctgctgatgagtgctctcgagaagagcatgag
gaagaggatgacggagagcatgatgaacttgatggtaaagctgagagtgaaggtgaagct
gaggggacgaatgaagcacactatgctggaggtgatggcaatgtgttgcaaatgtctgat
cgggttttgctaacttcaaagccacttacaaaatatgtggcttcacctgtatatgaggga
gtggtgaagtacccacgggtattctatggaaatgagacattctatgtgctttttaggcta
cagcagattctatatgaaaggttattatcagcaaagctgaattcagcatcgtctgagtca
aaatggagaactggaaaggatactggttctattccctatgacagattcatgagtgcgctg
catagtttgctcgatggttctgcagaaaattcaaagttcgaggatgattgccgatcaatc
attggaaatcagtcatatgtgctattcacgttggacaaattgatatataagctggtcaaa
cagcttcaaacagtctcgagtgatgagctggactgtaagctgcttcagttatatgaatat
gaaagattaaggaaacctgagaagtttgttgattcagcttattatgaaaatgctcatttc
ctcctccaggaggacagcatttaccggtttgaatgtacgtcttcgcctacccgtctgtcc
atccagttgatggatgatagaggtgacaagtctgaagtagttgcagttgctgtagatccc
aattttgcaggttatctgcacaatgattatctgtcagttaaacatgggaaaaaggagtct
tctgcagttctgctgaagagaaataagcggaaacgcgccgacaatgatgaatcaactgct
ttgtgcatggcaatggaacatgttattcttgtaaatggtctggaatgcaagatggcttca
aattcatcgaagatatcatatgtgcttgacacagaggacttctttttccgccagggtggt
aaaagaagaaaagtttcagctggcagattgtcatgtgcttaccaggctagagtagaacgg
ttccatcgtgttctgctgtctttatga
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