Solanum stenotomum: 125846724
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Entry
125846724 CDS
T08385
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125846724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125846724
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
125846724
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125846724
Prokaryotic type
125846724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PUB_1
Motif
Other DBs
NCBI-GeneID:
125846724
NCBI-ProteinID:
XP_049382264
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All DBs
Position
12:632764..642520
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AA seq
320 aa
AA seq
DB search
MASSSSKTLMDLSKQPAAKRLKQVSSTDNFTSSALSSSSSRKDCDEDPKDVVSFTPEQKS
RMEFNRSLAKAKRNLKLCSDKISKLNANGEGGGYVKLRELLIEETWVEALPGEFEKPYAG
NLCKFVEKEISGGVPIYPPLHLIFNALNTTSFDRIKAVIIGQDPYHGPGQAMGLSFSVPK
GVKVPSSLMNIYKELKQDLGCSIPLHGNLEQWAVQGVLLLNAVLTVRHHQANSHANKGWE
QFTDAIIKTISQKKEGVVFILWGNYAQAKARLVDETKHHILKSAHPSGLSANRGFFGCRH
FSQTNQLLEKMGMPPIEWQL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttcatccaaaaccctaatggatctatcgaagcaaccagcagcaaagcgt
ctaaaacaggtgtcttctaccgataacttcacttctagcgccttgtcatcttcatcttcg
cgtaaagactgtgatgaagaccccaaagacgtagtatcctttacgccggagcaaaagtcg
agaatggagttcaacagatcactcgcaaaggccaaaagaaacctcaaactatgttctgat
aaaatctccaaattaaacgcaaacggtgaagggggcggatatgtgaagttacgggaactg
ttgattgaggagacatgggtggaagcattgccaggggaatttgagaagccctatgcaggg
aacttgtgcaaatttgtggaaaaggaaattagtggtggtgtcccaatttatcctccacta
catctgatttttaatgctcttaacactacttcatttgacaggataaaggctgtcattatt
ggacaggatccatatcatggaccaggtcaggcaatgggcctctctttctcggtgcctaag
ggtgtgaaagtcccttctagtctgatgaatatatataaagaacttaaacaagatttgggc
tgttcaataccacttcatggaaatctggaacaatgggctgtgcagggcgttctgcttctc
aatgctgttctaacagtcaggcatcatcaggcaaattcacatgcaaataaaggctgggag
caatttacagatgctatcatcaaaacaatttctcagaagaaagaaggagttgttttcatt
ctgtggggaaactatgcccaagcaaaagccaggttagttgatgaaacaaagcaccatatt
ctcaaatcagcacacccttctggattgtctgcaaacagaggtttctttggatgccggcat
ttttcacagacaaaccaacttttggaaaagatgggaatgcctcccattgaatggcaacta
taa
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