Solanum stenotomum: 125846746
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Entry
125846746 CDS
T08385
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00900
Terpenoid backbone biosynthesis
sstn01100
Metabolic pathways
sstn01110
Biosynthesis of secondary metabolites
Module
sstn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125846746
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sstn01006
]
125846746
Enzymes [BR:
sstn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125846746
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125846746
2.5.1.29 geranylgeranyl diphosphate synthase
125846746
Prenyltransferases [BR:
sstn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125846746
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
RBD_SIN1
Motif
Other DBs
NCBI-GeneID:
125846746
NCBI-ProteinID:
XP_049382288
LinkDB
All DBs
Position
12:42951760..42953026
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AA seq
363 aa
AA seq
DB search
MSLSTTITTWGYSHYPLSDVGNKGRSRFCSPGFMPHLKMKFSTSPSSLSVSAVLTKEQTD
AESKSKKQAMEFKEYVLEKAISVNKALESAVSIKEPVKIHESMRYSLLAGGKRIRPMLCI
AACELVGGVESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLA
GDALLALAFEHIATQTKGVSSDRIVRVIGELAKCIGSEGLVAGQVVDIISEGISDVDLKH
LEFIHLHKTAALLEGSVVLGAILGGAPDEDVEKLRKFARCIGLLFQVVDDILDVTKSSQQ
LGKTAGKDLVADKVTYPKLIGIEKSREFAEELNKEAKAQLVGFDQEKAAPLFALANYIAY
REN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttcaacaacaattacaacttggggttacagccattatcccctttctgacgtt
ggaaataaaggcagatccagattttgctctcccggattcatgcctcatctgaagatgaaa
ttctccactagcccttcttctctttctgtctcagctgttcttacaaaggagcagacagat
gcggagagcaagagcaagaaacaagcaatggagtttaaagaatacgttcttgaaaaggct
atttctgtcaacaaggctttggaatctgcagtctctatcaaggaaccggtcaagattcat
gagtccatgaggtactctcttcttgctggtgggaaaagaatcagacccatgttgtgtata
gctgcttgtgagcttgttggtggggttgagtccacagccatgccagcagcttgtgctgtg
gagatgattcataccatgtctttgattcatgatgaccttccttgtatggataacgatgat
cttagaagagggaaaccaacaaatcacaagatttatggtgaggatgtggctgttttagca
ggggatgcacttcttgcattagcctttgagcacattgctactcaaacaaaaggggtttct
tctgatagaattgtgagggtgattggtgagttggctaaatgtattgggtcagagggactt
gtagctggtcaggttgtagatataatttcagaaggtatttctgatgttgatttgaagcat
ttagaattcattcatctgcacaagactgcagctttgttagaagggtcagtggtgctaggg
gctatattaggaggggcaccagatgaagatgtggagaagctaaggaagtttgcaagatgt
attgggttgttatttcaagttgtggatgatattcttgatgtcacaaagtcttctcagcaa
ttggggaaaacagctgggaaggacttggttgctgataaggtaacttaccccaaactgata
ggtattgagaagtctagggagtttgctgaggagttaaacaaagaagcaaaagctcagctt
gttggatttgatcaagagaaagcagctccattgtttgctcttgcaaattatattgcttac
agagagaattaa
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