Solanum stenotomum: 125846761
Help
Entry
125846761 CDS
T08385
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
sstn
Solanum stenotomum
Pathway
sstn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125846761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125846761
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
125846761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
125846761
NCBI-ProteinID:
XP_049382311
LinkDB
All DBs
Position
12:40637096..40649141
Genome browser
AA seq
1217 aa
AA seq
DB search
MGSLKRIPENIWSSIRSGVILYDFTRVVEELVFNSLDAGASKVSVAIGIGTCYVKVDDNG
SGVSRDGLVLMGEKYATSKYSHSDDMHAFPASFGFKGEALSSISDVSLLEIVTKTHGRPN
GYRKVLKDGKCLYLGIDDCRQDVGTTVIVRDVFYNQPVRRKQMHSNPKKVLHALKESLLR
IALVHPNVSFKIVDIESEDDLLCTRASPSPLPLLSSEFGIHLNSLNKLNASDGSFKLSGY
ISGPDVYTVKVLQYFYINSRFVSKGPIHKLLNNTAMSFDSASDIEKRSRSQIYPLFMLNL
NCPRSFYDFTLEPSKTSVEFKDWGPVLLFIGDTVANLWTESNSADIPMNIEIRKKRCRAQ
SCKGTLDLLSPLPKKLTGECNVRRDIQSPQNTLWESASEKPDPGSGFLCQIESSSRSIDG
SVAHCTVGVNWKSRCSVQPLSSNVLPTEDYFLDNKFNTSATSSYKSDCLLGSGWENGSQT
IVAGKSTEDASFRESLELIDNSTMTHERRKPFLRSCSLHRSLIHDGTSFDSDEDIKFEKS
DCRTKQNRLEDDYSVEFEVVDDVNRVLHQRSPRGKEIYFEKFSSCKTQSNALQRPKKISG
DSENFSLTKDILDEDDHLIFFKQTENYRSGLPSFSPELSPLPSDPLLGSRFLDVNPYIAE
NGIETSVKHEIGVTYNFGNMERNLLVPAINNLGKEDCLFPNPAKFDLDFYACSKEDLGCI
GGLDPWDIYSSGPSEFYYDGDDLSHIHSHGEEDLINCLTPRAMISSWVDGNSHKWNDAGN
RGKTDELIRKKKSRRSHSAPPFYQGKKKFFATSESSRTAAGNNNIKTVHDVPLMPETRAV
RRLGDSTEAICSELPQQSSHLCDQSSTPSCGDGVYSDERLSVKMKLVNIWNSRLQTQGEC
ISTRYGESKEEFAPTKETQSILDSGTKWGGFCPEITSGTGTESFKNQDTILNVTSGILHF
VGDSLVPDTIDKNCLGGAKVLQQVDKKFIPIVGGTTLAIIDQHAADERIRLEELREKVLS
GQKRSTTYLDSEQELVMPEIGYQLLHNYADQIQNWGWICNIHSQASKSFTRNLNLIHKQP
KSVTLLAVPCILGVNLTDVDLLEFLQQLADTDGSSIVPPSVNRVLNNKACRSAIMFGDAL
LPSECSLIVEELKQTSLCFQCAHGRPTTVPLVNLGALHEQIAKLGSWSKGSSEAWHGLHR
HAINVERAAKRLRSVVS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggggagccttaagcgaattcccgagaatatttggagctcaattcggtcgggcgttatc
ttgtatgatttcacaagggttgttgaggagttggttttcaacagcctcgatgctggagct
tccaaggtatctgttgctataggcattgggacctgctacgttaaggtggatgacaatgga
tctggtgtttcacgagatggactggtgctgatgggagaaaaatatgcgacgtcaaaatac
agccattcagatgatatgcatgctttcccagcaagctttggctttaaaggagaggcgctg
agctctatttctgacgtttctttgttggaaattgttactaaaactcatgggaggccaaat
ggatatcgtaaggttttgaaggacggcaagtgtttgtaccttggaattgatgattgtaga
caagatgttggtacaacagtcattgttcgggatgtattttacaaccaaccagttcgaagg
aagcaaatgcactccaacccaaagaaggtgttgcatgctctgaaagagtctctgctaaga
atcgcccttgtgcatcccaatgtctccttcaaaattgttgatattgaaagtgaggatgac
ctgctttgcacacgtgcttctccttctccactgccgctattgtccagtgagtttggaatt
catctgaattcccttaacaaattgaatgcaagtgatggttcattcaagctctcaggatac
atttcaggtcccgatgtttacacagtgaaggtccttcaatatttctatatcaattcaaga
tttgtttccaaaggaccaatacataaattacttaataacacagctatgagttttgacagt
gcgtctgacattgagaagcgaagtagatctcagatatatcctctgtttatgctgaaccta
aactgtccaagatctttttatgattttactttggagccttcaaagacctctgtggaattt
aaggattggggccctgtccttctctttattggggatactgttgcgaatctctggactgaa
agtaactctgctgatatacctatgaatattgagatcaggaaaaagaggtgcagggctcag
agttgcaaaggtacacttgaccttctttccccgctgccaaagaaactgaccggagagtgc
aatgtcaggagagatattcaatctccacagaatactctgtgggaaagtgcttctgagaaa
cctgatcctgggtccggatttctctgtcagattgaaagttcaagtcggtcaattgatgga
tctgttgctcattgcacagttggtgtaaattggaaatccagatgctctgtgcaacccctt
tcatctaatgttttacctacagaggattatttcctggataacaaattcaatacttcagct
acctccagttataaatcagactgcctgttaggttcaggatgggagaatgggtctcaaaca
attgtagctggcaaatcaacagaggatgcctcatttagggagtctcttgaacttattgac
aattcaactatgacgcatgagagaaggaaaccatttttgcgaagctgttctttgcacaga
agcctgatacatgatggaacatcttttgatagtgatgaagatattaagtttgaaaaaagt
gactgcagaactaaacaaaatcgccttgaagatgattatagtgttgaatttgaagttgtt
gatgatgttaaccgggtcttacatcaaaggtctcctagaggcaaggaaatatattttgag
aagttctccagttgcaaaactcagagcaacgcattgcagcggccaaaaaaaatttcaggt
gattcagaaaatttttctttaaccaaggacattctagatgaagatgatcatcttatcttc
tttaaacagactgaaaactatcgttctggcctaccatcttttagtccagaactgtctcct
ctgccatcagatcctttgcttgggagcaggtttctagatgttaatccttacatcgctgaa
aatgggattgaaacttctgttaaacatgaaattggtgtcacgtataattttggaaacatg
gaacgtaatctcttggttccggccataaataatttgggaaaagaggactgcttgtttcca
aatcctgcaaagtttgatctcgatttttatgcttgttctaaagaggatttgggctgtata
gggggacttgatccgtgggacatttatagttcaggtccttctgaattctattatgacgga
gatgatttgtcacatatacattctcatggtgaagaagatcttattaattgtttgacacca
cgagctatgatctcctcttgggtggatgggaactcgcataaatggaatgatgctgggaat
cgaggtaaaacagatgagcttataaggaagaagaagagtagaagaagtcattcagctcct
ccattttaccaaggcaagaagaagttctttgccacgagtgagtcttcaagaacggcagca
ggaaataacaatattaagactgttcatgatgtgccactcatgccagaaactagagctgta
agaagactgggggattctacagaagctatctgctcggagcttccacagcagtcatcccat
ctatgtgatcaatcttccaccccaagttgtggtgatggtgtttactctgatgaaaggcta
agtgttaaaatgaaacttgttaacatctggaacagcagattacaaactcaaggggagtgc
ataagtacacgctatggggagtcaaaagaagaatttgcaccaacaaaagaaactcaaagt
atcttagattctgggacaaaatgggggggcttctgtccagagattacaagtggtactgga
acagagagttttaagaatcaggatactatactcaatgtcacttctggcatattgcatttt
gttggtgattcattggttcctgataccattgataaaaactgcctggggggtgccaaagtt
ctccaacaggttgataagaagtttattccgattgtgggtggcacaacacttgctataatt
gatcagcatgctgcagacgagcgaattcgtttggaagaactgcgtgagaaggttctatct
ggacaaaagaggtcaacaacctatcttgattccgagcaagaattggtcatgcctgaaatt
ggttatcaattattacacaactatgctgaccaaattcaaaactggggttggatctgcaac
attcattctcaagcttcaaaatcatttaccaggaacttgaatctgattcacaagcagcca
aaatctgtcacacttcttgcggttccttgtattctgggcgttaatctaacagatgtggat
ctgttagaatttcttcaacagcttgctgacacagatggatcatcaatagtacccccatca
gtgaatcgggtcctgaataacaaggcttgcaggagtgcaattatgtttggagatgcattg
ttgccttcggagtgttctctcattgttgaggagttgaagcagacttcattgtgttttcaa
tgtgctcatgggcggcctactactgtacctcttgtcaacttgggtgctctgcatgagcag
attgctaagttaggttcgtggagtaagggttcctccgaggcatggcatgggttacatcgg
catgcaatcaacgtagagcgtgcagcaaagcgactaagatcagtcgtatcctag
DBGET
integrated database retrieval system
