KEGG   Solanum stenotomum: 125846781
Entry
125846781         CDS       T08385                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sstn  Solanum stenotomum
Pathway
sstn03020  RNA polymerase
sstn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125846781
  09124 Replication and repair
   03420 Nucleotide excision repair
    125846781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sstn03021]
    125846781
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125846781
Transcription machinery [BR:sstn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125846781
  RNA polymerase III system
   RNA polymerase III
     125846781
  RNA polymerase I system
   RNA polymerase I
     125846781
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125846781
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 125846781
NCBI-ProteinID: XP_049382341
LinkDB
Position
1:complement(12021571..12025442)
AA seq 227 aa
MDVNGSAMEVDVVNVSPCLASFVDDGTVESHRYFLARKTMLEMLKDRGFAIPNSEIDTTL
QEFREKYGQRPDVERLRISAMHRTDLTNKVLVIFCGPNSVKMNVIRSILSQIMNKESLSR
LILIIENPMTNPAMKVVEDSPFKTEIFQITDLLVNITKHVLKPKHELLTNAEKEQLLKKY
NLEEKQLPRMSQKDAIARYYGLEKGQVVKVTYSNEIIETHVTYRCVW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggatgttaatgggtcagcaatggaggtcgatgttgtcaatgttagtccttgtttagcc
agctttgttgatgatggtactgttgagagtcacaggtactttcttgcacgcaaaactatg
ctcgaaatgctgaaagatcgtggttttgcaatacccaattctgaaatcgacaccaccctt
caagaattcagagagaaatatggtcaaagacctgatgttgagcgcctcagaatctccgcc
atgcacagaactgaccttaccaataaggttttggtcatcttctgtgggccaaattcggtg
aaaatgaatgtcatccgcagtattttatctcaaataatgaacaaagaatccttgagtcgg
ctgatattaatcattgaaaatccaatgactaatccagctatgaaggttgtggaggactcc
ccattcaaaactgaaattttccagattacagacttacttgtcaacatcacaaaacatgtt
ttaaagccaaagcatgagttgttgaccaacgcagagaaggagcagctattgaagaagtac
aacttggaagagaagcagctaccgcggatgtctcagaaggatgcaattgctcggtactat
ggattggagaaggggcaagttgtgaaggtcacatacagcaatgagatcattgagacacat
gttacttatcgatgtgtctggtga

DBGET integrated database retrieval system