Solanum stenotomum: 125846787
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Entry
125846787 CDS
T08385
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125846787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125846787
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
SR proteins
125846787
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RNA_bind
RRM_occluded
RRM_3
RRM_Nup35
RRM_5
Motif
Other DBs
NCBI-GeneID:
125846787
NCBI-ProteinID:
XP_049382354
LinkDB
All DBs
Position
1:14109827..14113103
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AA seq
240 aa
AA seq
DB search
MRPLFVGNIEYDARQPELERLFSKYGRIERVDMKSGFAFVYFEDERDAADAIRSLDNLPF
GYDKRRLSVEWAKGDRGRPRDDSKVAVNQRPTRSLFVINFDPIRTRVRDIERHFEPYGKI
LNVRIRRNFAFVQYENQEDASKALECTHMSEILDRVVSVEYALRDDGERGDRYDSPRRDY
GRHGDSPYRRSPSPMYRRGRSSPDYGRPRNPAYEKYNGSSYDRYRSTEYGSYRSRSPVRR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctttattcgtggggaatatcgagtatgatgcacgtcaaccagaactggagcga
ttgttctccaagtatggaaggatcgagcgtgttgacatgaaatctggctttgcgtttgtc
tacttcgaggatgagcgtgatgcagctgatgccatccgtagtcttgataacctgccattt
gggtatgacaagcgccggttatcagtggaatgggcaaagggtgaccgtggtcgacctcgt
gatgattccaaggttgcagtaaaccaaagaccaacaagatctttgtttgtcattaacttt
gaccctattcgcactagggtgcgtgacatagagagacactttgaaccgtatggaaagatc
cttaatgttcgaatacgccgaaattttgcatttgtgcaatatgaaaatcaggaagatgcc
tcaaaagccttggagtgtacacacatgagtgagatcctcgacagagttgtttctgtagag
tatgctttgagggatgatggcgagaggggtgacaggtatgatagccctagaagagactat
ggcaggcatggtgatagtccttaccgaaggtcaccgagtcctatgtatcgcaggggtcga
tctagtcctgattatggtcgtcctcgtaaccccgcatatgaaaaatacaatggttcatca
tatgatcggtacaggagtacagagtatggaagctatcgcagcaggtctcctgttcggagg
taa
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