Solanum stenotomum: 125846809
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Entry
125846809 CDS
T08385
Name
(RefSeq) ABC transporter B family member 9-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125846809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125846809
04147 Exosome [BR:
sstn04147
]
125846809
04090 CD molecules [BR:
sstn04090
]
125846809
Enzymes [BR:
sstn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125846809
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125846809
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125846809
CD molecules [BR:
sstn04090
]
Proteins
125846809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_30
AAA_21
AAA_15
APS_kinase
DUF815
AAA_24
DEAD
AAA_7
DUF87
DLIC
SbcC_Walker_B
AAA_25
Phage_TAC_12
Motif
Other DBs
NCBI-GeneID:
125846809
NCBI-ProteinID:
XP_049382377
LinkDB
All DBs
Position
12:complement(26998034..27004566)
Genome browser
AA seq
1262 aa
AA seq
DB search
MEDNNNGEKKGDEDQKVSFYKLFSFADKFDVALMIIGTIGAIGNGLTQPLMTLIFGQLVN
SFGSSNSDEVVHKISKVSIDYVYLAIGAGVASLLQMSCWMVTGERQATRIRGLYLKTILR
QDIAFFDTETTTGEVIGRMSGDTILIQDALGEKVGKFIQFISTFVGGFIVAFFKGWLLSI
VLVSCIPALVIAGGAMALIMSKMSSRGQVAYAQAGNVVEQTIGAIRTVSAFTGEKLAIDK
YDSKLKIACASTVQQGLVSGVGLGTVLLIVFSTYGLAVWYGSKLIIERGYNGGDVINVIM
AIMTGGMSLGQTTPSLNAFAAGQAAAYKMFETINRKPLIDTSDTNGVVLENIKGEIELKD
VYFRYPARPDVQIFSGFSLIVPNGKTVALVGQSGSGKSTVISLLERFYDPEAGEVLIDGV
NLKKFQLKWLRQQMGLVSQEPILFATTIKENISYGKENATEDEIKTAIELANASKFLDKL
PQGLDTMVGEHGTQLSGGQKQRLAIARAILKNPRILLLDEATSALDAESERIVQEALEKV
MANRTTVVVAHRLTTIRNADLIAVVNAGKLIEKGTHTELIQDPNGAYSQLVRMQGGNREE
ENMKNMDLEKVDLTTDLDNNLSRSSSQRLSAMRRSTSQGSSRHSFTLNYTVPGLIGIHEA
EIGDEDKQKEDKGSLKKRKKVSIRRLAGLNKPELPYLLLGSLAAIIHGLIFPLFGLLLST
AIKIFFYPPQKLRSESRFWALMYFGLGVVTLLVVPFQNYLFGVAGGKLIERIRSLTFKKV
VHQEISWFDDPAHSSGAIGARLSTDASTVRTLMGDALALIVQNIATVVAGLVIAFTANWI
LALIILLVMPLIGVQGFLQTKMYKGFSADAKVMYEEASQIANDAVGSIRTVASFCAEEKV
MDMYQNKCEGPMKQGVKIGIVSGASLGFGSFILYCTNAFCFYIGSVLIQHGLASFGQVFK
VFFALTLSAVGVTQSTGMAPDASKAKDSIASIFDILDRKPEIDSSSDVGTTLAAVRGDIE
FKHVSYRYATRPDVQIFKDLCLTIPSGKTVALVGESGSGKSTVISLIERFYNPESGSIYL
DGVEIRQFKLSWLRQQMGLVSQEPVLFNETIRDNIAYSRQGHATEEEIIEAAKSANAHNF
ISSLPQGYDTSVGERGIQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERIVQEA
LDRVMVNRTTVVVAHRLTTIKGADVIAVVKNGVIAEEGKHDALMNIKDGVYASLVALHMT
SA
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggaggataataataatggagaaaaaaaaggagatgaagatcaaaaagtgtcattctac
aaattattttcttttgcagataaatttgatgttgccctaatgataattggaacaattgga
gctattggtaatggattaactcaacctttaatgacacttatttttggccagcttgttaat
tcttttggttcttcaaattctgatgaagttgtacataaaatctcaaaggtttctattgac
tatgtctacctcgctattggagctggcgttgcatcccttttacaaatgtcatgttggatg
gttactggagagagacaagcgactcgaattcgaggactatatttgaagacaatactgagg
caggacattgccttttttgacactgaaacaacaacaggagaagtcattggaagaatgtct
ggagatactattctcattcaagatgccttgggtgaaaaggttgggaagttcattcaattc
atctcaacatttgttggagggttcatagtcgcgttctttaagggatggcttctatcgata
gtcttggtgtcttgcatacccgctcttgtcattgctggaggagctatggcattgatcatg
tccaaaatgtcaagtcgcggacaagttgcctatgcacaagctggaaatgtagtagagcag
acaataggagcaatcagaacggtttcagcattcaccggagagaagctggcaatagataag
tatgacagcaaactgaaaattgcctgtgcttctactgtccaacaagggcttgtttcaggc
gttggacttggcacggtcttgctcattgttttttctacttatggacttgccgtttggtat
ggttccaagctgataatagagagaggttataatggtggagatgttatcaatgttattatg
gctataatgactggtggaatgtctctaggccaaacaacgccatctttgaacgcgtttgca
gcaggacaggctgcagcatacaaaatgtttgagacaatcaaccggaagcctctgattgac
acatcggacacaaatggggttgtgttggaaaacatcaagggtgaaattgaacttaaagat
gtgtactttaggtatccagccaggccagatgtgcagatctttagtggattctcacttatc
gttcctaatggcaaaactgtagctttggttgggcaaagtggaagtgggaagtccacagtt
atcagtttactggagagattctatgatccagaggctggagaagtattaatagatggtgtc
aatttgaagaaatttcaactcaaatggctaaggcaacagatgggattggtaagtcaggaa
cctatcctgtttgcgacaaccataaaagagaatatcagttatggtaaagaaaatgctact
gaagatgagattaagacagctattgagcttgctaatgcttctaagttcctcgataaactt
cctcaggggctagacactatggtaggtgagcatggaacacaactatctggaggacaaaag
caaagactggcaatagcaagggctatcttaaagaacccaagaatactcctccttgatgaa
gctacaagtgcacttgatgctgaatcagagagaatcgtgcaagaagcactcgaaaaagtc
atggcaaatagaacgaccgttgttgttgctcatcgtctaacgaccattagaaatgctgat
cttatagcggtggtgaatgctggaaaactaatagaaaaaggaacacatactgagttgata
caagatccaaatggggcatattcccagcttgtgcgaatgcagggagggaatagagaagaa
gaaaacatgaaaaacatggaccttgagaaggtggatttaaccacggatttggataataac
ctgagcaggtcatcaagccagcgattgtcagcaatgaggcgatcaacaagccagggatca
tctagacattctttcacactcaactatactgttcctgggctaattggtattcacgaagca
gaaataggagatgaggacaagcaaaaagaagataagggaagcttaaagaaacgaaagaaa
gtttccattaggcggcttgctggactaaacaaacctgagcttccatatctgttacttgga
tcactggctgcaatcatacatggtcttattttcccattatttggactcttattatcgaca
gctattaaaatattcttttacccaccacaaaagctgcgaagtgaatcaagattctgggca
ctcatgtattttggcctcggtgtggtaactttgctagttgtacctttccagaactactta
tttggagttgcaggggggaaattgatcgagagaattcgttctttgacatttaagaaagta
gtccaccaagaaatcagctggttcgatgatcctgcacattcaagtggtgcaattggtgca
aggttatcaactgatgcttccacggtcaggactcttatgggtgatgcactggcacttatt
gtacagaacatagcaactgtagttgccggcctcgtgatagccttcactgccaattggatt
ttagcacttataatccttctcgtgatgcctttaattggtgtgcaaggattcctccagacc
aagatgtacaaaggctttagtgctgatgcaaaggtgatgtatgaagaagctagtcaaata
gcaaacgatgctgtcgggagtataagaacagtggcatcattctgtgcagaggagaaagtg
atggacatgtaccaaaacaaatgtgaaggtccaatgaagcaaggagtgaagattggaatt
gttagtggagcaagcttaggctttggttcttttatactgtattgtacaaatgccttctgt
ttctacataggatccgtccttattcagcatggattggcatcatttggccaagtttttaag
gttttctttgcattgactctatcagctgttggggttacacaaagcacaggaatggctcca
gatgctagcaaagccaaggattctatagcctctatatttgacattcttgacagaaaaccc
gagattgactcaagttctgatgttggtactactctagctgctgttcgcggagatattgaa
ttcaaacatgtgagttacaggtatgcaactcgcccggatgtccaaatcttcaaggattta
tgcctaactatcccttctggaaagactgttgctctagtgggagagagtggaagcggtaaa
tcaactgtcattagcctaatagagaggttctacaatcctgaatcaggatcgatatatttg
gatggtgtggaaatccgacaattcaagctaagttggctaagacaacaaatgggcctggtt
agtcaagaaccagtactgtttaacgaaacaattcgtgacaacattgcctacagcagacag
gggcatgcaacagaagaagagatcattgaagcagcaaaatcagcaaatgcacacaacttt
atatcttcattgcctcaaggatatgatacatcggttggggaaagaggaatacaattatca
ggtggacaaaagcaaagaatagctattgcaagagctatactgaaggatccaaagattctt
ttgctagacgaggcaacaagtgctttagatgcagaatcagaacgtatagttcaagaagca
ttggatcgagtaatggtaaataggacgactgtggttgtagctcatcgcttaaccacaatc
aaaggagctgatgtcattgctgttgtgaagaatggagtcattgctgaggaaggaaagcat
gatgctcttatgaacataaaagatggagtttatgcatccttagtagcattgcatatgact
tcagcctga
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integrated database retrieval system
