Solanum stenotomum: 125846839
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Entry
125846839 CDS
T08385
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
KO
K12184
ESCRT-I complex subunit VPS28
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125846839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125846839
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125846839
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125846839
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125846839
Exosomal proteins of other body fluids (saliva and urine)
125846839
Exosomal proteins of colorectal cancer cells
125846839
Exosomal proteins of bladder cancer cells
125846839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
GDH_C
DAHL
SHOCT
Motif
Other DBs
NCBI-GeneID:
125846839
NCBI-ProteinID:
XP_049382469
LinkDB
All DBs
Position
12:complement(38345461..38349374)
Genome browser
AA seq
209 aa
AA seq
DB search
MEVKLWNDKREREMYENFAELFAIIKATEKLEKAYVRDIISPAEYEAECQKLIAHFKTLS
STLKDTVPSIEQFHDTYKMDCPAALNRLVTSGVPATVEHRAAAATSSASSASVVAECVQN
FITAMDSLKLNMIAVDQVHPLLSDLSSSLNKLLILPSDFEGKTKMREWLSRLSKMGAADE
LTEQQARQLHFDLESSYNSFMAALPSAGT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaagctatggaatgataagcgggaaagagaaatgtatgaaaactttgcagag
ctctttgctataataaaggcaacggaaaagctcgagaaggcgtatgttcgcgacatcatt
tcaccagctgaatatgaagctgaatgccagaagttgattgctcatttcaaaaccttatct
tccacattgaaagataccgtacctagcattgagcaatttcatgacacctacaaaatggat
tgccctgctgccttaaaccggcttgtgacctctggggtgcctgccactgtggagcaccgt
gccgccgctgctacatcatctgcatcctcagcttctgttgtggctgagtgtgtgcagaac
ttcatcactgccatggactctttgaagctgaatatgattgctgtagaccaggtccatccc
cttttgtcagacctatcatcttcccttaataaacttttaatacttccatctgattttgag
gggaagacaaagatgagagagtggctctcaaggctgtcaaaaatgggagctgcagatgag
ttgacagaacagcaggcccgtcaactccacttcgatcttgaatcatcatacaattctttc
atggcggcactgccctctgctggaacttaa
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