Solanum stenotomum: 125846899
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Entry
125846899 CDS
T08385
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
sstn03015
mRNA surveillance pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125846899
09122 Translation
03013 Nucleocytoplasmic transport
125846899
03015 mRNA surveillance pathway
125846899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125846899
03041 Spliceosome [BR:
sstn03041
]
125846899
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
125846899
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
Cap binding complex
125846899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
125846899
NCBI-ProteinID:
XP_049382545
LinkDB
All DBs
Position
12:complement(16706759..16737105)
Genome browser
AA seq
255 aa
AA seq
DB search
MASLFKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEI
KKIVMGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAYAPVMPSPHYGRH
NGGNHGRGGSYRHGRDYHRKRHREDDHHRPDYPKRTYDRESRRNSDHESRPEKNPRFRES
GDSDEEDDDDRKRRT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggatttagccaagatttcagcttatagggacagaagatttcca
ggaacgcaagaagaatttgaagatgctttgttaaggtcgataactgtttatgttgggaac
atgtctttctacacaacagaggaacaagtatatgagctgttctctcgtgctggagagatt
aaaaagatagtgatgggattggataagaattccaaaactccttgtggattctgctttata
atgtactactctagagacgacgctgaagactctgtcaaatatatcagtggaacaattctt
gatgatcgccctattcgtgttgattttgattggggatttcaagaaggtaggcaatggggc
cgtggtaggagtggtggacaggtacgcgatgaatatcgtactgactatgatccaggtcga
ggtggttatggaaaattggtccaaaaggaattggaagcacaaaggcagctagtggattat
ggtacaggatcgttgggcgcgtacgcaccagttatgccgtcacctcactatggtagacat
aatggtggaaaccatggtcgtggaggctcttatcgacatggtagagactatcatcgcaag
cgacacagggaagatgatcaccatcggccagattatccaaagaggacttatgaccgtgaa
tctaggagaaactctgatcatgaatccagaccggaaaagaatccgcgtttccgtgagagt
ggtgattctgatgaagaggatgatgatgataggaagcggcgtacctag
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integrated database retrieval system
