Solanum stenotomum: 125847055
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Entry
125847055 CDS
T08385
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125847055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125847055
Membrane trafficking [BR:
sstn04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125847055
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
125847055
NCBI-ProteinID:
XP_049382714
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All DBs
Position
12:31933050..31941101
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AA seq
1447 aa
AA seq
DB search
MGCLNQQSEVNTPFSEPKDCTVKPSKGALACMVNSEIGAVLAVMRRNVRWGFRYAAADDQ
LEHPLIHSFKELRKSIFSWQHHWNRVDPLLYLQPFLDVIQSDETGAPITGVALSSVYKFL
TLEIIDSSIMNVEKALHQIVETVTSCRFEVTDPASEEVVLMKILQVLLACMKSKASANLS
NHHVCNIVNTCFRLVHQASAKSELLQRIARHTMHELVRHIFSHLPNIVSKTHEFDQQSRL
CADSEAGEKQHDNGCVSAESTGKSASAAVPSNASDKRDETMDEKTQKEEIASNGENSMMD
PYGVPCMVEIFHFLCSLLNVMESIEIGSRSNPIAYDEDVPLFALGLINSAIEVSGTSSGN
HPELLALIQKDLFHNLMRFGLSMSPLILSTVCSIVLNLYHHMRIKLKLQLETFFSGVLLR
IAQSKHGSSYQQQEVAIETLVDFCRQPMFMPEMYANFDCDISCSNVFEDLANLLSKSSFP
VNIPLSALNTLALDGLIAMMQGMAERISQDSFVSEQASIDLGEYRSFWTEICKDYSDPNH
WVPFLRKMKVIKRKLLIGVDHFNRDPKKGMEFLQGVHLLPEKRDPKSVACFFRYMTGLDK
NLIGDFLGSHEDFYIEVLHEFAGTFDFRDMNLDIALRIFLETFRLPGESQKIQRVLEAFA
ERYYEQSQNILADKDAALLLSYSIIMLNTDQHNAQVKKKMTEEDFIRNNRRINGGNDLPR
EFLSELYHSICEDEIRITPDRGAGIPMLAPSHWIGLVHKSRQTSPYIICDPGPYLDYDMF
AMLSGPAIASISVVFDNVEQEDVWETCINGFLAIAKIAAAYSFDDVLNDLVVSLCKFTTL
LLPSYVDEFPVAFAEDGKARLATLAVFTVANEYGDHIRSGWKNILDCILSLHKLGLLPTR
LFSDAADDLEFTADADPRRPTSLSLSPSHFPSLAPSRKSSGLMGVFSQLLYLDEEPAPQP
TEQQLAARQQTLQTIQSCHIDSIFAESKFLQAESLLQLVRALVLAAGKPRKRNNSLEDEE
TAVFCLELLIAITINNRDRIMLLWQVVYDHIASVVHLTTMPSTLVEKAVFGLLRICQRLL
PYKENLTDELLKSLQLILKLDARVADAFLEQITREVMHLVKANAMQIRSHIGWRTIISLL
SFTARHPEASETGFDTLAFIMADGAHLLPANYVLCLNVAVQFADSHVGNVDQSVRSLDLM
AGSLISLIRWSHQAKEALGQEAAVKMTQDITEMWLRLIQGLRKFCKDRREEVRDHAILML
QRCLTGVDGIHIPEDLWLQCFDQVIFTLLDELLNLAQPSFVKDYRSTEGAIVLALKLMFK
MFLQSLNHLSQSTSFCKLWLGVLSLTERCMKVKFKGKLSEKIPELISELLKNTLLVMKTS
GILGPSNPVGGDSFWKSTWLHVHKICPSLQTEIFPTNEAEQSEKQHIAGCSPLAEGNVII
SSGNSTA
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccttaatcagcagagtgaagtcaatactccattttcagaacccaaggattgc
actgtaaagccttccaaaggtgccttagcatgtatggtaaattcagaaattggtgctgtt
ttggctgttatgaggagaaatgtaaggtgggggttccgctatgctgctgctgatgatcag
ctagagcatcctctcatccattctttcaaggaattacggaaaagtatcttctcatggcaa
catcactggaacagagttgatccactcctatatcttcagcctttcttggatgtgattcaa
tctgacgaaactggtgcaccaataaccggtgttgcattgtcttctgtttacaaattctta
acccttgaaataattgattcatctatcatgaatgtggagaaagctttacatcagatagtt
gagactgtgacaagttgccgctttgaagtgactgatcctgcctccgaggaagtggtgctt
atgaagatacttcaggttcttttggcttgcatgaaaagtaaggcatcagcaaatttaagt
aatcatcacgtgtgcaacattgtaaacacttgctttcggcttgttcatcaagctagtgcc
aaaagtgaactgctgcagagaatagcaagacacacaatgcatgaattggtgagacatatt
ttctctcacctgcctaacattgtcagcaaaacgcatgaatttgatcagcaaagcagattg
tgtgctgactcagaggcaggcgaaaaacaacatgacaatggttgtgttagtgcagaatcc
actggtaagtcagcatcagctgcagttccttccaatgcatcagacaagagggatgaaaca
atggatgagaaaactcaaaaggaggagattgctagtaatggagaaaactctatgatggat
ccatatggggtcccctgcatggtggagatatttcatttcctgtgttctcttctgaatgtg
atggagtccattgaaattggttctagatcaaaccctatagcatatgatgaagatgttccc
ttgtttgcactggggttaattaattcagccatagaagtaagtggtacttcatctggaaat
catcctgagttattggctttgatacagaaagacttgttccacaatctgatgcgttttggc
ttgtctatgagtcctttaattctttcaacagtttgtagcattgttctaaatttgtatcat
catatgcgtattaagttaaagctacagcttgaaactttcttctctggtgtgttactgagg
attgcccaaagcaagcacggatcttcttatcaacaacaagaggttgccatagaaactctt
gttgacttctgcaggcagcccatgttcatgcctgagatgtatgcaaattttgattgtgac
atatcttgcagcaatgtatttgaagaccttgcaaacctgttatccaagagttcctttccg
gtcaacatcccactatcagctttaaatacgcttgccttggatggtctaattgccatgatg
cagggaatggccgagagaataagccaggattcatttgtttctgagcaagcttcaatagat
ctgggtgaatatagatcgttttggacagagatatgcaaggactacagtgatcctaatcat
tgggttccatttcttcgtaagatgaaggtcataaagaggaaattgttgattggagttgat
cactttaaccgagatccaaaaaagggtatggaatttctccaaggagtgcatttgttacct
gagaaacgtgacccaaaaagtgtagcatgctttttcaggtatatgactggcttagataag
aatcttatcggggatttcctaggaagtcatgaagacttctatattgaagtgcttcacgaa
tttgcaggaacatttgattttcgggacatgaacttagacatagccttgcgaatcttttta
gaaaccttcagattgcctggggagtctcagaaaatacagagggtgcttgaggcatttgct
gagagatattatgagcagtcgcaaaatattctggctgacaaagatgctgcactattgttg
tcatattcaattattatgctcaatacagatcaacacaatgcccaggtaaaaaagaagatg
acggaggaagatttcatccggaacaaccggaggataaatggaggaaatgacctccctcgg
gaatttttgtccgagctttaccactccatctgtgaggatgagatccgaattaccccagat
cgaggtgctggtattccaatgctggcaccaagccattggattggtctagttcataaatca
aggcaaacttccccatatattatctgtgatcctggtccatatcttgattatgatatgttt
gctatgttgtctggtcctgcaattgcttccatctctgtggtttttgataatgtggagcaa
gaggatgtttgggaaacatgtatcaatggattccttgccattgccaaaattgcagctgcc
tatagcttcgatgatgtgttaaatgatttggtagtatctctttgcaagttcactaccctt
ttgcttccatcttatgttgatgaatttcctgttgcatttgcggaagatggtaaagctaga
ttggccacattagcagtcttcacagtagcaaacgaatatggagaccacattcgctctggt
tggaagaacatcctagactgcattttgagtttgcacaaattgggccttctccccacacgt
ctctttagtgatgctgctgatgacttagagtttactgctgatgcagaccctaggagacct
acttcactttctctatcaccatctcattttccttcattggctccatcaaggaaatcatct
ggcttaatgggggtgtttagccaactattatatcttgatgaagaacctgcgccacagcca
actgaacaacagcttgccgcacgtcagcagactcttcagacaattcagagttgtcacatt
gatagcatctttgccgagagtaaatttttgcaagctgagtccctgttacagcttgttcgg
gcccttgtgttggctgcaggcaagcctcgcaaaagaaataattctctggaagacgaagag
actgcagtattttgtctagagttgcttattgctatcacaataaataaccgtgacagaata
atgcttctttggcaggtcgtctatgatcacatagcaagtgttgtccatttaacaacaatg
ccatctactttggtagagaaggctgtgtttggtctgcttcgcatatgccaaaggttactt
ccatacaaggaaaatctcacagatgagcttctcaagtctctgcaacttatcttaaagctt
gatgctcgggttgctgatgcatttcttgaacagataacccgggaggttatgcaccttgtc
aaagcaaatgctatgcagatacgatctcatataggctggcggacaatcatatcgctgctt
tcttttactgctcggcatcctgaagcatctgaaacaggttttgatacgctagcattcatc
atggcagatggggcccacctcttgcctgctaactatgtcctctgtttgaatgtggcggtg
cagtttgctgattctcatgttgggaatgttgatcaatctgtgagatctttagatctgatg
gctggatcacttatctctcttattagatggtctcaccaggcgaaggaagcacttgggcag
gaggctgctgtaaaaatgacccaggatataacagaaatgtggctcaggctgatacaggga
ctgcggaaattttgtaaagaccggagagaagaggtaagggatcatgccatcttgatgctg
cagaggtgcttgactggagttgatgggatccatatcccagaagatttgtggttgcaatgt
tttgatcaggtgatatttacattactggatgaattactcaatcttgcccagccgagcttt
gtgaaggattataggagcactgaaggagcaatagttttggcactgaagctcatgttcaaa
atgtttttacagtctttgaatcatctctcccagtcgacatccttctgcaaactatggtta
ggggtattgagtctaacagagagatgcatgaaggtgaaatttaaagggaaactgagtgag
aagatccctgaactcatttccgagctcctaaagaacactctacttgtcatgaaaacaagt
ggaattctggggccaagtaatcctgtaggaggggacagtttctggaagtcaacatggttg
catgtccacaaaatatgcccatctcttcagacagaaatctttcccacaaacgaagcagag
cagtcggaaaaacagcatatagcaggctgtagtcctctggcagagggaaatgttatcatc
tcatctggtaatagcacagcttga
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