Solanum stenotomum: 125847632
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Entry
125847632 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125847632 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125847632
Membrane trafficking [BR:
sstn04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125847632
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
TRAPPC13_C
Gryzun
NTS_TR130
TPR_16
Motif
Other DBs
NCBI-GeneID:
125847632
NCBI-ProteinID:
XP_049383227
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All DBs
Position
12:40291767..40300697
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AA seq
1176 aa
AA seq
DB search
MEEYPEELRTPPVALVSLVGCPELHASITTHLHSEQPPINALALPDFSKISIFAKPSKDA
SIPPPPVAGILKKDWLLKHRTRVPAVVAALFNSDHVSGDPAQWLQVCTNLENLKGVLRGR
NVKLVVVVVAPSNSKDDLSEDRMIALRKRAELDSKYLIIFVPSESELQQSLIRLGNTFSE
LANSYYKEEGRRIKARLERKNFHSAELNIRCCFKAAVYAEFCRDWVEALRLYEDAYHAVR
EMVATSTRLPPIQRLIEIKSVAEQLHFKISTLLLHGGKLAEAIAWFRQHYASYRKLVGAP
EVIFLHWQWLSRQFLVFAELLETSSITAQHVSTLVSEATDRTTQWEFHSAYYFQLAAHYL
KEKSSSLELALSMSETSGEIDGNADSVIAASYVGQFAKLLEIGDAVIMQSLSDEDYSRYA
LAEGKRLQDSYEIIALLKKSFEAYNNDKASRMAAYCGFQMAREYFTVDEYSNAKEVFENV
ASLYRQEGWVTLLWNVLGYLRDCSKKTALVKDFIEYSLEMAALPVSTNVAGQRDCGPAGP
ASLAQREIIHNEVFSVIRGETDSASTEENSSLKVTADNPLYLEIDLVSPLRAVLLASVAF
HEQVVKPGAETVITLSLLSQLPLNVEIDQLEIQFNQSECNFVIVNAQRSHLAAISCLQPG
RRVETAPTLELRTNKWLRLTYDVKPEQSGKLECIYVTARWGQHFTICCRAESPASMSDLP
LWKFEDIMQTIPMKDPGLAFSGQKAVQVEEPDPQVDLKLDSSGPALVGESFIVPVIITSK
GHSVHSGELKINLVDTRGGGLLSPREAESFSSDNLHVELVGISGRECEDLANSENIQKIQ
PSFGLISVPFLDEGESWSCKLEIRWNRPKPIMLYVSLGYFPQSPELSSQRAHVHKSLQIE
GKTAVVMSHRFMLPFRREPLLLSKTKPASDSDQIPSLPLNETSMLVVSAKNCTEVPLRLL
SMSVEAVDASTCDVKTKSKNPEEHVLLVAGEEFKQVFGVTPEVNLPKLNMGIVCLRWRRD
HGDGERLTSCSTTSAVVTKHSLPDVNVEQPPLIVSLDCPPHAILGNPFTYSIKITNRTQF
LQEVKYSLADSQSFVLSGPHNDTTFILPKSEHILSYKLVPLASGFQQLPKITLTSVRYSA
GFQPSVAASTVFVFPSEPHFGLKDIGEMRMESVAAE
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtatccagaagaactccgaactccgccggtagcattagtatctcttgtagga
tgtccagagcttcacgcttcaatcacaactcaccttcactccgagcagccgcctattaat
gctctcgcattgcctgatttctccaagatctcgattttcgctaagccttcaaaggacgct
tctattccgcctccacctgtcgccggaatcctaaagaaagattggcttctcaaacatcgg
actagagttccggcagttgtagccgctctctttaactccgatcacgtctccggcgatccc
gctcagtggcttcaggtctgcaccaatcttgaaaatctcaaaggtgtattacgcggaagg
aacgtaaaattggtcgtggtggttgttgctccatcaaattctaaagatgatttaagtgaa
gaccgtatgattgctctcagaaagcgtgcagaacttgactccaagtatcttatcatcttt
gttccaagcgaatcagaacttcaacagtccctgatcaggttgggaaacacattttcagaa
ttagctaattcgtattacaaggaggaaggaagaagaattaaagcacgtctcgaaaggaaa
aatttccattctgcggagctgaatattcgatgctgtttcaaagctgctgtatatgcagaa
ttttgcagagattgggttgaagcattacggctatacgaggatgcctatcatgcagtgcga
gagatggttgcaacatcaactagattgcctcctattcaacggttgattgagatcaaaagt
gtggcagagcaactgcatttcaagatttctacattgttgctgcatggtggaaaacttgct
gaagcaattgcctggttccgccagcactatgcttcttacaggaagctcgttggagcacca
gaagttattttccttcactggcaatggttaagccggcaatttctagtatttgctgaatta
ctagagacaagctctatcactgctcagcatgtttccactttggtttcagaagctactgat
agaacaactcagtgggaatttcattcagcttattacttccagctagcagctcattacttg
aaggaaaagagttcttccctcgaacttgcgctatctatgtctgaaacttctggtgagatt
gatgggaatgccgattctgtgatagctgcttcttatgttggtcagtttgcaaaactgctg
gagattggagatgcagttattatgcaatctcttagtgatgaagattattcccgttatgct
ctggctgaaggaaagagattgcaggactcttatgaaattattgctctccttaaaaaatct
tttgaagcatacaacaatgataaagcctctcggatggctgcctactgcggtttccaaatg
gctagagaatatttcacagtagatgaatatagtaatgcaaaagaagtttttgagaatgtt
gctagtctttatcgacaggagggctgggttactctattatggaatgtcttgggttacctt
agagactgctcaaagaaaactgctcttgtgaaagatttcattgagtactctcttgaaatg
gctgctctaccagtatctactaatgttgctggtcaaagagactgtggcccagctgggcct
gcaagtcttgcccagagagaaataatacacaatgaagtgttttctgtaatacgaggagaa
acagatagtgcatctactgaagaaaacagtagcctgaaagtaacagctgataatcccctt
tatcttgagattgatctcgtcagtcccctcagagcagtacttcttgcttcagttgctttt
catgaacaagtagttaagcctggtgcagaaacagtgattaccctctcccttctatctcaa
ctaccccttaacgttgaaattgatcaattagaaatccaatttaatcagtcggagtgtaac
tttgtcattgttaatgctcaaagatcccatttagctgcaatatcctgtttgcagcctggt
cgtcgagtggagacagctcccaccctggaacttcgcacaaacaaatggctgcggctcaca
tacgacgtgaaacctgagcaaagcggaaagctggaatgcatatatgtaactgcaagatgg
ggtcaacattttactatctgttgccgagctgaaagtcctgcctccatgagtgatttaccc
ctctggaaatttgaagacataatgcaaactataccaatgaaggatcctggtctggctttc
tctggtcagaaggctgtccaagttgaagaaccagacccacaagtggatctaaagttagat
tcgtctggccctgcattggtcggagagagttttattgttcctgtgattatcacctcaaag
ggccatagtgttcactctggtgaattgaaaattaaccttgttgatacaagaggtggtggc
ttgcttagtccaagggaggcagaatcattttcatcagataatcttcatgtagaacttgtt
ggaatatctggacgagaatgtgaagatcttgctaattcagagaacattcaaaaaatccag
ccctcttttggattgatttcggtcccatttttggatgagggagagtcttggtcctgcaaa
ttagaaattagatggaaccgtcctaagcctatcatgctttatgtgtcactgggttacttt
cctcaaagtccggaacttagctcacagagagctcatgtgcacaaaagcttgcaaattgaa
ggtaagactgctgttgtgatgagccatcgctttatgttgccatttcgaagggaaccactg
ctactgtcaaagaccaaaccagcttccgattctgaccaaataccatctctgcctttgaat
gaaacaagtatgctagttgttagtgctaagaactgcactgaggtgcctttgcgattgttg
tccatgtccgtggaggcagttgatgctagcacctgtgatgtgaaaactaagagtaagaac
ccagaagaacatgtgctgcttgtggcaggagaagagtttaaacaggtttttggtgtcact
cctgaggttaatcttcctaagctaaacatgggcattgtgtgtttgagatggagaagggat
catggagatggagaaagattgacttcctgtagcacaacatctgcagttgtaacgaaacac
agtctgcctgatgtaaatgtggagcaacctccactgatcgtgagtctagattgtcctcct
catgctattcttggaaatccgtttacatactccatcaaaattactaacagaacacagttt
cttcaggaggtcaaatactctttagcggattcacagagttttgttttatcagggcctcat
aatgatacgacttttattttgccaaagtctgagcacatacttagttataagcttgtaccg
cttgcctcaggttttcagcagcttcctaaaattacattgacctcagtacgatactcagct
ggctttcaaccttcagttgcagcttctacggtgtttgtattcccatctgagcctcatttt
gggttgaaggatattggagagatgagaatggaatctgttgcagccgaatag
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