Solanum stenotomum: 125847726
Help
Entry
125847726 CDS
T08385
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00906
Carotenoid biosynthesis
sstn01100
Metabolic pathways
sstn01110
Biosynthesis of secondary metabolites
Module
sstn_M00097
Lycopene biosynthesis, geranylgeranyl-PP => lycopene
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
125847726
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sstn01006
]
125847726
Enzymes [BR:
sstn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
125847726
Prenyltransferases [BR:
sstn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125847726
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
125847726
NCBI-ProteinID:
XP_049383356
LinkDB
All DBs
Position
12:39219348..39223175
Genome browser
AA seq
438 aa
AA seq
DB search
MSVALLWVVSPNSEVLNGTGFLDSVREGNRGLESSRFPSRNRNSMWKGRFKKGGRQEWNF
GFLNADLRYSCLGRSRTENGKSFSVQSSLVASPAGEMAVSSEKKVYEVVLKQAALVKRHL
ISTEDIEVKPDVVVPGNLGLLSEAYDRCGEVCAEYAKTFYLGTMLMTPDRRRAIWAIYVW
CRRTDELVDGPNASHITPQALDRWEARLEDIFNGRPFDMLDAALSDTVSRFPVDIQPFRD
MVEGMRMDLWKSRYNNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTESVYNAALALG
IANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFMKKQIQRARK
FFDEAEKGVTELSSASRWPVLASLLLYRKILDEIEANDYNNFTRRAYVSKPKKLLTLPIA
YARSLVPPKSTSSPLAKT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgctttgttgtgggttgtttctccaaattctgaggtcttaaatgggacagga
ttcttggattcagtccgagaagggaaccggggtttggaatcatccaggttcccatctcgg
aataggaattcgatgtggaaagggagattcaagaaaggtgggagacaggagtggaatttt
gggtttttaaatgcagatttgagatattcgtgtttaggaagatcaagaactgagaatgga
aagagtttttctgtacagtccagtttggtggctagtccagctggagaaatggctgtgtca
tcagagaaaaaggtgtatgaggtggtattgaagcaggcagctttagtgaagaggcatctg
atatctactgaggacatagaagtgaagccggatgttgttgttccgggtaatttgggcttg
ttgagtgaagcatatgatcgttgtggcgaagtatgtgcagagtatgcaaagacattttac
ttaggaaccatgctaatgactccagacagaagaagagctatctgggcaatatatgtgtgg
tgcaggagaactgatgagcttgttgatggccctaatgcatcacacataactccacaagct
ttagataggtgggaggccaggctggaagatattttcaacgggcggccatttgatatgctt
gatgcagctttatccgatactgtttccagatttcctgttgatattcagccattcagagat
atggttgaaggaatgcgtatggacttgtggaaatccagatacaacaactttgatgaacta
tatctatattgttactatgtcgctggtacagtaggattgatgagtgttccaattatgggc
attgcacctgaatcaaaggcaacgacggagagtgtatataacgcagctttggctttaggg
atcgcaaatcaactaaccaatatactcagagatgtaggagaagatgcaagaagaggaaga
gtatacttacctcaagatgaattagcacaggcagggctctccgatgaagacatttttgct
ggaagagtgactgataagtggaggatctttatgaagaagcaaattcagagggcaaggaaa
ttctttgatgaggcagaaaaaggtgtcacagaactgagctctgctagtagatggccggtg
ttggcgtcgttgctgttatatcgcaagatactggacgagattgaagcgaatgactacaac
aacttcacaaggagggcttatgtgagcaagccaaagaagcttctgacgttgcccattgct
tatgcaagatctctagtgccccctaagtcaacttcttccccactagcaaagacatga
DBGET
integrated database retrieval system
