Solanum stenotomum: 125847842
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Entry
125847842 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125847842
KO
K15559
regulator of Ty1 transposition protein 103
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125847842
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125847842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Cep57_MT_bd
P4Ha_N
CREPT
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
125847842
NCBI-ProteinID:
XP_049383506
LinkDB
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Position
12:complement(50185568..50194243)
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AA seq
515 aa
AA seq
DB search
MNIASETMGSTFNTQILVDKLEMLNSSQQSIETLSHWCIFHMTKAKQVVETWAQQFHCSP
REQRLSFLYLANDILQNSRRKGAEFVAEFWKVLPDALRDVIENGNEFGRNAALRLISIWD
ERKVFGSRGQILKEEFAGKNVGNGKHSGGKVRNSAGDALDKIVSSYQMLYGGQIDEDAIL
SRAKNAISCVEKIDKEIGSDLNPGHLNGSGIVDELKGQHTILKDCVEQLTTVESSRANLI
SHLREVLQEQEYKLDQVRNHLQAAQSHADQVGSICGQLLNFDGNGQILVEQNRKEANTSQ
APHTFISGNREQSAPVMYTRQVSYEKSGNLDEDMKSAAAAVAAKLTASTSSAQMLTYVLS
SLASEGVIGSSTKESSHDNQPEKRMKLENDRSFYGPPQNPQEPVTFFSQPNSVQHNLPST
GGESTPIEPPPLPSSPPPLAPLPPMQPYPVPQFIQTSGQLPSSAFVYATSQQPSTLAGFV
PPVNGISPFTSSIAYQGYSSDSSLYSQSMAPVTRQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgcttccgaaacaatggggagcacatttaatacacaaattttggtggataag
ctggaaatgctcaatagttcacagcaaagcattgaaactttatcacattggtgtattttt
cacatgaccaaagcaaaacaagttgtggaaacttgggcccagcaattccattgctcacca
cgtgaacagagattgtcatttctttaccttgcaaatgacatccttcagaatagtcggaga
aagggcgcagaatttgttgctgaattttggaaggttcttccagatgctcttcgtgatgtt
attgaaaatggaaatgagtttggaagaaacgctgctttgcggctgatcagtatctgggac
gagagaaaagtctttggttctcgagggcagattctgaaggaagagtttgctggaaagaat
gttgggaatggaaagcatagtggaggcaaagtgagaaactcagctggagatgcccttgac
aaaatagtttcaagctatcaaatgttgtatggtggtcaaattgatgaagatgcgatattg
agcagagctaaaaatgctattagctgtgttgaaaaaatagataaggagattgggagtgac
ttaaatccaggccatcttaatggatctggtatagtggatgagctcaaggggcagcacaca
atattgaaggactgtgttgagcagctaacaactgttgagtcatccagggcaaacctcatc
tctcatctcagagaggtcctccaggaacaggaatataagttggatcaagtacgcaatcat
cttcaggctgctcagtcccacgcagatcaggttggcagtatttgcggacagttgctgaat
tttgatggcaatgggcaaatcttggttgagcagaatcgaaaggaagctaacacctcccaa
gctccacacacattcatatctggaaatcgcgaacaatctgctccagtgatgtacactcga
caggtatcttatgaaaaatctggcaaccttgacgaagatatgaagtctgcggctgctgca
gtggcagcaaagctcactgcatcaacgtcttcagcccagatgctgacttatgtcctctca
tccttggcgtccgagggtgtcataggcagctcaactaaagaatcttcccatgataatcaa
ccggagaaaaggatgaagcttgaaaatgaccgctctttttatggtccccctcagaatcct
caagaacccgtcacatttttctctcagccaaattcagtgcaacacaatcttccaagcact
gggggggagtcaactccaattgaaccacctcctctaccatcatcgcctccaccattggca
cccttgcctcctatgcagccatatccagtacctcagttcattcagacatctgggcagttg
cctagttcagcatttgtttacgcaacaagccagcaaccttcaacattggctggttttgtc
cctcctgtgaatgggatttctcctttcacatcttcaattgcttatcaaggttattcaagt
gatagtagtttatatagccagtcgatggcaccggttacgcgtcagtag
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