Solanum stenotomum: 125847978
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Entry
125847978 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125847978
KO
K13144
integrator complex subunit 7
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125847978
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
125847978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
INTS7_HB
Motif
Other DBs
NCBI-GeneID:
125847978
NCBI-ProteinID:
XP_049383706
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All DBs
Position
12:18880723..18889220
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AA seq
1154 aa
AA seq
DB search
MEKTPSACAMQWNIELEKGLRSKKPGKSIEAILDIGPRLEWWSRESNLHAAEYKIFGLIP
GEDKLFANAILLRLADAFMSGDKHMKICIVKIFLSELKQRRQLRSQGRKDEGILSKDKVD
SYRELLTRIKIVFDSGNVEERALALVLFGCWAYIAKDSADVRYLILSSLWSMHILEAKAS
LFAAGCFSELADDFAYVFLEMLGGLLVSSETSRAIRLAGGRAFAKMWCPILLADIAHKTG
VKLILESSEEEFSLVMLVSLSKIASKWTPLIPRQVELLSSFLTKDRGLSLQVMALKCLRF
ILAKGMYHFPANSNVTLKLFGVINQLDFPPALHFDALRALCKILPPNLDTIPCTEILTIF
SKFLQIVEFKLQSPVISERVFAIHVLACIFDKLLGILKDAAGGIGSIVSSRMLTFTLDRI
SQLIKLVVDNPHPDKGTEQEVKSLLFILVDLVERHQNLSGIVLDKICIVIEHLVGMLNEI
TSMTDSVSEDHHITELDKENHTSTASRVLIYLSQILITCFEKLDVSTGGATLVFNRMEHL
VEHVHQCSLLPVYIHLIYDLLLHFHAAYQCMWLEIGEDLGSNRNFRPSRYSSLSHDGSLS
QHEILIIDRVKQILVKKDYWLSYKLAKYAACNGAWLVAAYIFGELIPMVQSDICCFWLKS
LSHLSELERKVQLFGLTLSGNAAGEIMTADHIENVIGVANKLCSLEEAFDASVSGLAFSF
QRWFITLRSKVVGTVADVLKLLSMNLLSQDATGSTEQIEARILVQHSNSSKGLSSLLQLL
AHASSQFMRLVKEFDLLATSFIVMDRKSMKIVSDLGLSCSLLAFSTGLTLCFASSHGKQN
CSTYGLETTDEQFHTQLVHDLLRRLGFTDLETSKNLRHLLDFHRSSRSCSMQEFRNEVST
TCVEARDVAKLCKYSIQRFLRLQAIHVHENNGISRIPRDALQLLFNIIFSWIQIPFRTPK
HFFQLRPPVSAELFITNEDGQRIDDISVLSGFRLPLTLCIQLRNILPDQLSQVSKLYCIL
HSRISFQVFSANKDKKVSESSCQAWKSDHMVGLNDKLLHFTTGTTERDGLHAMENAGGTS
AVDKFVCFDPNEKGQGFATCLLDVSAFPVGSYQIKWHSCCIDNNGAYWSLMPLNTNQFFT
VQESSNSGQSVRVP
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaactccatctgcttgtgctatgcaatggaacatagaacttgaaaaaggcctc
cgttctaaaaaacctggtaaatctatcgaagccatactagatattggaccaagacttgag
tggtggagtagagagtccaatcttcatgctgccgagtacaaaatatttggcttaattccg
ggggaagataagctatttgcaaatgctatccttcttaggcttgcagatgcatttatgtca
ggagacaaacatatgaagatttgtatagtgaagattttcttgtcagagctcaagcagagg
aggcagttgaggagccagggaagaaaagatgagggaatcctttcgaaggataaagtagat
agctatagagaacttttgactagaataaagatagtattcgactctggaaatgttgaagag
agagcactggctttagttctatttggttgctgggcttatattgcaaaagatagtgctgat
gttagatacctcatcctttcaagcttgtggtcgatgcatattctggaggcaaaggcttct
ttgtttgcagctggatgcttttctgaactggcagacgattttgcttatgtatttctggag
atgcttggaggtctgttggtgtcatctgaaacatcaagggctataaggttagctggagga
cgtgcttttgctaaaatgtggtgcccaattttactagcagatatagctcataagactggt
gtaaagcttatcctagaatcttcagaagaagaattctctttggtgatgttagtttcactt
tccaaaattgcttctaagtggacacctttaattcctagacaggtggaattgctttcctca
tttttgactaaggatagaggtttgagcctgcaagttatggcattaaaatgtcttcgtttc
attttagccaaaggaatgtatcacttcccggccaattcaaatgtgactctaaagttgttt
ggcgtcataaatcagttagattttccaccagctttgcattttgatgctctaagagcttta
tgcaagatacttccccccaacctagatacaattccatgcacagagatcctcactattttc
tccaagttcttacaaattgttgagttcaaactacaatctccagtcatctcagagagggtg
tttgcaattcatgtattagcttgtatttttgacaagcttttggggatactgaaagatgca
gcaggtggaattggctcaattgtttcatctcgtatgcttacattcaccttagatcgcatc
tcccaactaattaagttagtggttgataatcctcatccagacaaaggaacggaacaggag
gtaaagagtttactttttattctagttgatttggttgaaagacatcaaaatctctctggt
attgtgctggataagatctgtatagttattgaacatctggtcggcatgcttaatgaaatc
accagtatgacggattcagtctcagaagatcatcatataacagagcttgacaaagaaaac
catacatcaactgcatcaagagtcttgatttatttatcccagattctgataacttgcttt
gaaaagctggatgtctccactggtggtgccaccctagtctttaacagaatggagcatctg
gttgagcatgtgcaccagtgcagcttacttcctgtttacatccacctaatatatgacctt
ttattgcacttccatgctgcatatcagtgtatgtggctggagataggggaagatctgggt
tctaatagaaattttcgtccatctcgttatagttctctctcacatgatggttccctgtcc
cagcatgaaattctcattattgatcgtgtgaagcaaattttggttaaaaaagattattgg
ttgtcttataagctggcaaaatatgcggcatgtaatggtgcatggttagtagctgcgtac
atatttggggagctaatacctatggttcaatctgatatctgttgtttttggttaaaatcc
ttatcccatctttcagaattagaaaggaaagttcagttgttcgggcttactctttctgga
aatgcagctggggaaattatgacagctgatcacattgaaaatgttattggggtcgccaac
aagctttgttctttagaggaagcttttgatgcctctgtttctggtcttgcttttagtttt
cagagatggtttattactttaagatcaaaggttgtcggaactgtggcagatgtactaaaa
ttattgagcatgaatttgctttcacaagatgccaccggaagtacagaacaaatagaggcg
aggattttggttcagcactcgaattcttcgaaaggactcagctcattgttgcaattgctt
gcccatgcttcttcccagttcatgaggctagtaaaggaatttgatctcttagcaacgtca
ttcattgtcatggacaggaaaagtatgaagatagtttctgatcttggattaagttgttca
ctgttagcctttagtactggattaacactatgttttgccagttcccatggtaaacaaaat
tgtagtacttatggtcttgaaactacagacgagcaatttcatactcagctagttcatgac
ttgttaagaagacttgggtttacagacttagagactagcaaaaatctgcggcatcttttg
gatttccatcgaagctctaggagctgttccatgcaagaattccgaaatgaagtctctaca
acttgtgttgaagcaagagatgttgctaaactttgtaaatattccattcagagatttctt
cgtttgcaagcgattcatgtacatgaaaataatggtatatcccgaattcctcgtgatgct
ttgcagttgctgttcaatattattttctcgtggatacagattcctttccggactcccaaa
catttttttcaattaaggccccctgtttctgctgagcttttcataacaaatgaagatggt
caaaggatagacgatatatctgtcttgtcaggctttcggctccctctaactctgtgtatt
cagctaagaaatatattgccagaccagctgtctcaagtgtcgaagttgtactgcatcctt
cactcaaggatatcctttcaagtattcagtgcaaacaaggataagaaggtatcagagtcc
agttgtcaagcttggaaaagcgatcacatggtaggccttaatgacaagctattgcacttc
acaacagggactaccgagagagatggattacatgctatggagaatgctggagggacttca
gccgtggataaatttgtgtgttttgatcctaatgagaaagggcaaggatttgcaacctgc
ttgctagatgtttctgcatttcctgtgggttcttaccaaatcaaatggcacagctgttgt
atagacaacaatggtgcttactggagccttatgcccctgaacactaatcagttcttcact
gtacaggaatcttctaatagtggtcagtctgttagagtgccatag
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integrated database retrieval system
