KEGG   Solanum stenotomum: 125847986
Entry
125847986         CDS       T08385                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125847986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125847986
   03041 Spliceosome [BR:sstn03041]
    125847986
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125847986
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125847986
Spliceosome [BR:sstn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125847986
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_Nup35 BRAP2
Other DBs
NCBI-GeneID: 125847986
NCBI-ProteinID: XP_049383715
LinkDB
Position
12:49448599..49452242
AA seq 391 aa
MEEQNGTANGVKIKLEEEETNDDLRTTPDHQNDAGASQPLTGDGASPGKIFIGGLARETT
SAQFVKHFGKYGEIIDSVIMKERRTGQPRGFGFVTYADPSVVDKVIEDDHVINGKQVEIK
RTIPRGGGSSSKDFKTKKIFVGGIPTTISEDEFRDFFLKFGEVKEHQIMRDHSTSRSRGF
GFITFDTEKSVEDILANGNKLDFSGTQVEIKKAEPKRPNAPQPAPFRRQGNPRAAFGGGL
SDAYGGYGDSGYGIGAGAGAGAGPYRSGGPYGGRSSAFGGYSGAGMGGYGAYGGGGAYGG
GFREEASFGYSSRYGSGAFGRGYDVGGGYGGAGEGYGGYAAGGGGYGSGYGAAGLGSGYG
GDSAGGSMYGSSRGSYGGAGAGSGRYHPYGR
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggaggaacaaaatgggactgcaaatggtgttaaaatcaagctggaggaagaagaaact
aatgacgacctaagaactactcccgaccatcaaaacgacgccggcgcttctcaacctctt
accggagatggtgctagtcctggaaagatttttattgggggcttggctagagagacaact
tcagctcaatttgtcaagcactttggtaaatatggtgaaattattgattccgtgattatg
aaggaaaggcggacaggacagccacgtgggtttggttttgtcacttatgctgatccctcc
gtggtagataaagtcattgaggacgaccatgttataaatggaaagcaagtggaaatcaag
cgaactatacctagaggagggggttccagctcaaaagatttcaagacgaagaagattttt
gtgggcggcatcccaacaacaattagtgaagatgagttcagagacttctttttaaagttt
ggagaggtgaaagagcaccagatcatgcgtgaccattctactagtcgttctcgtggcttt
ggattcatcacttttgacacagaaaaatctgttgaggatatcttggctaatggaaacaag
cttgatttttctggaacccaggtggaaatcaagaaggctgagcccaagagacctaatgcg
ccacaaccagccccattcaggcgtcaagggaatccaagagctgcatttggtggtggatta
tcagatgcttatggtggatatggagactctggttatggtattggtgctggtgctggtgct
ggtgctggtccttataggtctggtggcccctatggtggcagatccagtgcatttggtgga
tatagtggagcaggaatgggtggatatggagcatatggtggcggtggtgcctacggagga
ggcttcagggaggaggcttcttttgggtattctagccgttatggcagtggagcctttggt
agaggctatgatgttggtggtggatatggaggagcaggtgaaggttatggaggatatgct
gctggtggcggtggatatggcagtggatatggtgctgctggtcttggcagtgggtatgga
ggagatagtgccggaggttcaatgtatggaagtagtagaggaagctatggtggtgctggt
gctggttcaggcagataccacccttatgggagatag

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