Solanum stenotomum: 125848004
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Entry
125848004 CDS
T08385
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125848004
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125848004
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125848004
NCBI-ProteinID:
XP_049383735
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Position
12:31373758..31375853
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AA seq
448 aa
AA seq
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MNNQPKMTHSLFVIFFVFGAIIPAFNAHIGDFDEVWRRRAEEAMKFTLQTYESEPANITL
AFNQKTRDSVKELSAVVSKNETRRELGTKKYEGPCTVTNPIDKCWRCDPNWADNRKKLVE
CSMGFGYKTTGGRDGKYYVVSDSSDDYTTPKPGTLRHAVIQKEPLWIIFDRNMKIKLHQE
LIMQGDKTIDGRGATVHITGGASIMIQYTKNVIIHGLHIHDIVEGNGGMVRDAVDHIGFR
TKSDGDGISIFGSSNIWIDHMSMENCYDGIIDAVEGSTGITISNGHYTDHNEVMLFGASD
SSSIDQKMQITLAFNHFGKRLIQRMPRCRWGYIHVVNNDYTHWNMYAIGGSKNPTIISQG
NRFIAPPDIFKKQITKREYSPESVWMQWTWRSEGDLYMNGAYFVQAGDPDWSKKHQNLYD
GIAAAPADQVTWMTRFAGALNCKVGKAC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaacctaagatgacgcattccctctttgttatattttttgtatttggtgca
ataattcctgccttcaatgctcatattggagattttgatgaagtgtggaggaggagagcc
gaggaagccatgaagttcactctccaaacgtatgagagcgaacctgccaatatcacatta
gcatttaaccagaaaactcgcgattctgtgaaggaattaagtgcagtagtatccaagaat
gaaacaagaagggagctaggaaccaaaaaatacgaagggccttgcacggtcacaaatcca
attgataagtgctggagatgtgacccaaattgggccgacaacaggaagaagctagtagaa
tgttctatgggctttgggtacaagaccacgggcgggagggacggcaaatattacgtcgtc
tcagactcatcagatgattataccactccaaaacccggaaccctccgtcatgctgttatc
caaaaggaaccattgtggatcatttttgacagaaacatgaagatcaagcttcaccaggaa
cttatcatgcagggtgacaaaactatcgatggtcgtggtgctactgttcacattactggc
ggtgctagtattatgattcagtacacgaaaaacgtgatcatccacggattacacattcac
gatatagtcgaagggaatggtggcatggttagagatgcagtggaccacattggtttccga
acaaagagtgacggagatggtatttcaatatttggttcgtctaatatttggatcgatcat
atgtcgatggagaattgttacgatgggatcattgatgctgtggagggatccactggtatc
accatttctaatggccattacacagatcataatgaagttatgttgtttggtgcaagtgat
agttcttcaattgatcaaaaaatgcaaattacactagcattcaatcattttggaaagaga
ttgatacagaggatgcctaggtgcagatggggatacattcatgttgtcaataatgattat
actcattggaatatgtatgctattggtggtagtaaaaatcccaccatcattagccagggt
aatcgtttcatcgctcctcctgatatcttcaagaagcagattacaaagagggagtactcc
ccagaatcagtatggatgcagtggacatggagatcagagggagatttatacatgaatgga
gcatactttgttcaagctggtgatcctgattggtcaaagaaacatcaaaatctttacgat
ggcattgctgctgcaccagcagatcaagtcacatggatgacaaggtttgcaggggcactt
aattgcaaggtgggaaaggcttgttag
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