Solanum stenotomum: 125848021
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Entry
125848021 CDS
T08385
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125848021
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125848021
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125848021
NCBI-ProteinID:
XP_049383753
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All DBs
Position
12:31220606..31380030
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AA seq
397 aa
AA seq
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MEMSKTRTNVALVVLLVTCLTVGAAVAADNSTRRHLAKKYKGPCMATNLIDKCWRCDPHW
ADHREKYADCAMGFGSKAIGGKGGRVYVVTDNSDKDVENPTPGTLRHAVIQKEPLWIIFE
RHMHIKLKRELLMQSHKTIDGRGFNIHIEKGAGLKMQSVNNIIITNLHVHNIGITPGGMI
RDSVDHVGIRSEDEGDGISLFAATDVWIDHVSMSRATDGLIDAVQGSTGITISNCHFTDH
DKAMLFGANDNHVEDKKMQITLAYNHFGKRLDQRMPRVRFGFFHIVNNDYTHWMRYAIGG
NSGATIISQGNRFIAQASLLIKEVTHREKAEESEWKNWTWLSIDDDMQNGAFFRTSGDQD
ALSKLKNLNLIPAEPSYKVGILTKFAGSLSCTAGRPC
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtcgaaaacaagaaccaatgtggctcttgttgtgttgttggtaacttgtttg
actgtaggggcagcagttgcagcagacaacagcacaagaaggcacttggccaaaaaatac
aaaggaccatgtatggccactaatcttattgacaaatgctggagatgcgaccctcattgg
gctgatcatcgcgaaaaatatgctgattgtgcaatgggcttcggcagcaaggcgattggt
ggtaaaggtggacgtgtttacgttgtcacagataactctgacaaggacgttgagaatcct
acacctggtacccttaggcacgcggtgatccaaaaagagcccttgtggatcatattcgaa
agacatatgcatattaagctaaagagggaactactgatgcaaagccacaaaacaatcgat
gggcgtggattcaacattcatatcgaaaaaggagctggacttaagatgcaaagtgtgaac
aacattatcatcactaatcttcacgttcacaacattggaataactcctgggggtatgatc
agggattcagtagaccatgttggcataagaagtgaggatgaaggtgatggcatcagtctc
ttcgcggcaaccgatgtctggattgaccacgtatccatgtcacgcgccacggatggactc
attgatgccgtccaaggatcaaccggtatcaccatctccaactgtcatttcaccgatcac
gataaagcaatgttgtttggtgctaatgataaccacgtcgaagacaagaaaatgcaaatt
accttggcctataaccatttcggtaaaagattagatcaaaggatgcctagggtcagattc
ggattcttccatattgtcaacaatgattacacccattggatgaggtacgctattggtgga
aacagtggagcaacaattattagtcaaggtaaccgttttatcgcacaagcgagtcttttg
attaaagaagtgacacatagggaaaaagcagaagaatcagaatggaagaattggacttgg
ctatccatagatgacgatatgcaaaatggtgccttttttagaacatctggtgatcaagat
gcactaagcaaattaaagaatttaaatttaataccagcagagccatcatacaaagttgga
attcttacaaagtttgcaggatcactttcttgcaccgcaggacgtccgtgctag
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