Solanum stenotomum: 125848042
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Entry
125848042 CDS
T08385
Name
(RefSeq) F-box/LRR-repeat protein 3-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125848042
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125848042
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GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box_5
LRR_8
LRR_At1g61320_AtMIF1
APOBEC1
Motif
Other DBs
NCBI-GeneID:
125848042
NCBI-ProteinID:
XP_049383786
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Position
1:10527609..10534432
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AA seq
641 aa
AA seq
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MDSALFVLNEDLLIRILSFITHDSDRKAFRLVCKAFLRVDSFHRTHLRILRPEFITTLFS
KFPRIYSLDLSVCPQINDGAVSMLMGYGLSDWSRSLRRLVLSRTTGLKSAGLEILMKSCP
VLESIDVSYCWGFGDREAAALSFGGSLRDVKLDRCLGLTDVGLAKIAIGCQCLEKLSLMW
CIEITDLGIDFLSKKCTQLKQLDISYLKVTSVSLHSISSMEKLELLAMVGCGIVDDEGLH
YLGKGCPSLQALDVSRCDRLSSSALAFLINGHPSMLQVYASHCFHEFPTKVIQGLKDLKN
LKKLILDGAPVSESFFKIINFNCKYLVEIGLGKCKGVTDKGILQLVSGGVNLNILNLTCC
SELTDNAISAITDSCRSVLCLKLECCNLLTEKSLYHLGLHCSLLEELDLTDCFGVNDTGL
YNLSKCTKLICLKLGLCTNITDKGLYCVARNCSEIRELDLYRCQGIGDDGLYALSSGCKR
MQKLNLSYCSEVTDRGIECLGHLPELSDLEMRSLLNVTGTGLTALATGCKRLSELDVKDC
TSIDDSGFMALAYYSRNLQQINLSHCAISDVGLCMVMGNLTRLQDAKLVNLYNVSTNGFE
VALRASCVRLKKVKLIASLRLHLTPDIVKTLKARGCRIRWD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggattctgctttgtttgttcttaacgaggatcttcttatcagaattctttccttcatt
acccatgattccgaccgcaaagctttccgtttggtttgtaaagcattcctccgggttgac
tctttccaccgtacccatctccggatccttcgtcctgagttcattacaacccttttctcc
aaattcccacgtatttactcccttgacctttccgtttgcccccaaattaatgacggagct
gtttccatgctgatgggttatgggttgtcggattggagtaggagcttgaggaggctggtg
ctgagtcgaaccactgggttgaaatcagccgggttagagatacttatgaagtcttgtcct
gttttggagtctattgacgtgtcttactgctggggttttggtgatagggaagctgcggct
ttatcttttggtgggtctttaagggatgtaaagctcgacaggtgtttgggtcttactgat
gttggtttggcgaaaatagctattgggtgtcaatgcctagagaaacttagcttgatgtgg
tgtattgaaattactgatcttgggattgattttttgtccaagaaatgtacacaactgaag
cagcttgacatttcatatttaaaggttactagtgtgtcactgcattctataagcagtatg
gagaagttggagcttttggctatggttgggtgtggcattgtggacgatgaaggactacat
taccttggaaaagggtgtccttcgcttcaggcactggatgtatcaaggtgtgacagacta
agctcatctgccttagctttcttgattaatggacatccttcaatgctacaagtctacgct
agtcactgtttccatgagtttcctactaaagtcatccaagggctgaaggacctaaagaat
ctgaaaaagctcatacttgatggagcaccggtttctgaatcattcttcaagatcattaat
ttcaattgcaaatatttggtcgaaatagggcttggaaaatgcaaaggagtgactgacaag
ggcattctccagctggtatcagggggtgttaatttaaatatcttgaatctcacatgctgt
agcgaacttaccgataatgcaatatcagctataacagattcttgccggagtgttttgtgc
ctcaagttggagtgctgcaacttactcacagagaagagcctatatcacctgggattacat
tgttccttacttgaggagcttgatcttactgattgttttggagtcaatgacactggactt
tataacttgtctaaatgtacaaagcttatatgcctaaagttgggattatgtactaacatt
actgacaagggactgtactgtgtggctagaaattgcagcgagattcgtgaacttgatcta
taccggtgccaaggaattggtgatgatggactctatgctttatcaagcggttgcaaaaga
atgcagaagttaaacttgtcttattgcagtgaggttactgatagaggaattgagtgtctc
ggccatctaccagagctctctgacctcgagatgcggagtcttttgaatgtcacaggcact
ggtttaacagcacttgctacgggatgcaagagactttctgaattggatgtgaaagactgt
actagcattgatgattcaggtttcatggcgcttgcttattactctaggaatttgcaacag
attaatctgagtcattgtgcaatctcggatgtgggcctgtgcatggtgatggggaacttg
acacggttgcaggatgccaagctcgtaaacctttacaacgtgtcaaccaatggctttgag
gttgctcttcgggcttcctgtgttcggctgaaaaaagttaagttgattgcctccctgaga
ctacatcttacgccggacatagttaagacattgaaggcaagaggttgcaggattaggtgg
gattaa
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