Solanum stenotomum: 125848050
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Entry
125848050 CDS
T08385
Name
(RefSeq) protein argonaute 2-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125848050
03036 Chromosome and associated proteins [BR:
sstn03036
]
125848050
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125848050
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125848050
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125848050
microRNA pathway
RISC loading complex
125848050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125848050
NCBI-ProteinID:
XP_049383798
LinkDB
All DBs
Position
12:complement(29111106..29115315)
Genome browser
AA seq
981 aa
AA seq
DB search
MDRGSYNGRGGGNRGRDRGRVRGYNEPRQGRARGYNEPRQDRARAYYELEQVRARGQHEQ
EQGRGRSGRDGFQMSSSSSNQPRPSGQHQFTETGAPENQPVSQTPEATVISWADRLRRGV
GTASPRPQQQQDASVLLGKINLKDSKKREPMGRPDGGNNSCKSISLHANHFPVKFKEGTI
ILHYDVDVQQVDENQPGKPVTEMFDLRKIREKWLVDKPAEFPCDKTAYDGNKNIFSAVDL
PAKPLTVNCSVGDDAKECKYTLTFKLVAQLQLDNVTGYVKRNLQNIPRDVLQGMDLVMKE
NPRRCRISVGRCFYSNNAYKNLNCGVVARKGFQQSLKLTSEGLALCLDYSELLVIPEKIS
VIGFLLEYYGGKIEDIFKYRRAAASDLLTGLKVKVTHRPIKQKFVIKKLIPGETRALKFC
LQDTEEEVYLVDYFNEKYTRKIQYKHLPSLDIGKGDKQNYVPVEFCDLVAGQRFPKDRLK
TTSPKPEERRKLICETVLATDGPRTTIPGNFKIRVDDHMTCISGRILPVPVLKLGGQIPP
YLNDKTCQWNLVGKSVVEGKALQRWALIDFSSKESRDLLKLQVDKFVLNLRDRCRELSIN
MDEPAVVHSTDMKELSAVSKVENLLKVVVDAADQKIKGKLQMIVCVMTSKHNGYKYLKWV
SETKIGIVTQCCLSSNANKLHNQYLPNLCMKINAKLGGSNMELMERLPNFGSDDNVMFIG
ADVNHPAAGNMKCPSIAAVVATINWPAANKYAARVSPQEHRTEKIVEFGKMCKDLVRTYA
ELNSVKPNKIVVFRDGVSESQFDMVLNEELNDLVEAIYESNKYQPAITLVVAQKRHHTRL
FPFDGNVSPGTVVDTQIVHPSGFDFYLCSHYGQLGTSKATHYHVLYDENGFKSVDLQRLI
YNMCFTFARCTKPVSLVPPVYYADLVAYRGRMFQEVLKEMNSSRSTTSSSEASSSSSSPI
DSFAQGFYDLHRDLQNTMFFV
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtggaagctacaacggacgtggtggaggtaaccgtggtcgtgatcgtggtcga
gttcgtggttacaacgaaccgagacaaggccgtgctcgtggttacaacgaaccgagacaa
gaccgtgctcgtgcttactacgaactggaacaagtccgtgctcgtggtcagcacgaacag
gaacaaggccgtggacgtagtggaagggatgggtttcagatgagttcatcttcatctaac
cagccgaggccatcgggtcagcatcagtttactgagactggggctccggaaaatcagccg
gttagtcagactccggaagctactgttattagttgggccgatagactcagaagaggtgtt
ggtactgcttcaccacggccacaacagcaacaggatgcttcagttcttctggggaaaatc
aatctgaaggattcaaaaaaacgtgaacctatgggacgacctgatggtggaaacaattct
tgcaagtcgattagcctgcatgctaatcactttcctgttaaatttaaagaggggactatc
attttgcattatgatgtggatgttcaacaggttgatgagaatcagcctgggaagccggta
acagaaatgtttgatctccgtaagataagagaaaagtggttggtggataagcctgctgaa
tttccctgtgataaaactgcatatgacggtaataagaacattttcagtgctgttgatctt
cctgctaagcctttaactgtgaactgctctgttggggatgatgctaaggaatgcaagtac
acgcttaccttcaagcttgttgctcaattacaacttgacaacgtgaccggatatgtgaaa
cgaaacctccagaatattcctcgtgatgtactacaaggaatggatttggttatgaaagaa
aatcctagaaggtgcaggatttctgtaggtcgttgtttctactctaacaatgcttacaaa
aatttaaattgcggggttgttgcacgtaaaggttttcagcagagcctaaagctaacatct
gaaggtcttgcgttgtgcttagattactcagaactcttggtaatcccggaaaaaatttca
gtgataggctttctgctggaatattatggaggaaaaattgaagacattttcaagtataga
agagcagctgcaagtgatttattgactggtttgaaagtcaaagtaactcatcgtcctatc
aagcagaagtttgttattaagaagctaattccaggagaaactcgtgctcttaaattttgc
cttcaagataccgaagaggaggtttaccttgtagactacttcaatgaaaaatatacccgt
aaaattcagtacaagcatttaccttcactagatattggaaaaggtgataagcaaaactat
gtcccggtggaattctgtgacttggttgcgggacaacgatttcctaaggatcgtttgaaa
acaacctcgcctaaacccgaagagagaaggaagttaatatgtgagacggtactggctaca
gatgggccgcgcacgactattcccggtaattttaagattcgtgttgatgaccacatgacc
tgtatttcgggtcgtattcttcctgtccctgttttgaagctaggcggtcaaattccacct
tatttgaatgataagacatgccagtggaaccttgttgggaaatctgtggtggaaggcaag
gcgcttcaacgatgggctttgatagattttagctctaaggaaagcagggacttgttgaag
ctacaagttgataaatttgtcttgaacttgagagatcggtgcagagaattgagtattaat
atggacgaacctgctgtagtacattctaccgacatgaaggagctctctgcagttagcaag
gttgaaaatctcctcaaagttgtggttgatgcagctgaccaaaaaataaagggtaaactt
caaatgatagtttgtgttatgacatcaaagcataatgggtacaagtatcttaaatgggta
tctgagaccaaaattggaattgtaacccagtgttgcttgtcttctaatgccaacaagcta
cataatcaatatcttcccaacctctgtatgaagattaatgcaaaacttgggggcagcaat
atggaacttatggaaagactccctaatttcggaagtgatgacaatgtcatgttcattgga
gctgatgttaatcatcctgctgcaggaaatatgaaatgtccatccatagcagctgttgtt
gccaccatcaactggccagctgctaataaatatgccgctagagtttctccacaggaacac
aggactgaaaagattgtagagttcgggaaaatgtgtaaagacctagttcgtacttatgcg
gaactcaactcggttaaaccaaacaaaattgttgttttccgtgatggtgtgagcgagagt
cagtttgatatggtactcaatgaagagttgaatgatttggtagaagctatatacgaaagt
aataagtatcaaccagcaatcactcttgttgtggctcagaagagacaccatacacgacta
tttcctttcgatggaaatgtgtctccgggtactgttgtggatacacaaattgttcatcca
tctggttttgacttctatctttgcagccactatggacagttgggtactagcaaggcaact
cactatcatgttctatatgatgagaatggcttcaaatctgtcgatttacaacgtcttata
tacaacatgtgcttcacttttgcacggtgcactaaacctgtttcacttgttccaccagtt
tactatgcagaccttgttgcttacaggggacggatgttccaagaggtgcttaaggagatg
aactcttctaggtctacaacttcatcctctgaagcttcgtcgtcatcatcttctccaatt
gactcatttgcacaaggattttatgatttgcaccgtgatttgcagaacacaatgtttttc
gtttga
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