Solanum stenotomum: 125848287
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Entry
125848287 CDS
T08385
Name
(RefSeq) upstream activation factor subunit spp27-like isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125848287
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
125848287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
Prothymosin
Nop53
Merozoite_SPAM
CCDC106
DUF3381
Motif
Other DBs
NCBI-GeneID:
125848287
NCBI-ProteinID:
XP_049384088
LinkDB
All DBs
Position
12:complement(19797451..19805170)
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AA seq
344 aa
AA seq
DB search
MVSDNELVDRLREFLSTSDLNITTNSDVRRKLEKDFNIDLSDRKVFIREQIDLYLESHYQ
VNQENENNEEEMEEENDQGPSAEVKSEVSEEEEDPEEEEEEEDPEEEEEEESEAVAKVKR
RSSKKNPAKKNETGKRKAGGFTKLCSLSPQLQKITGVAELARTEVVKRMWHYINENDLKN
PSDKRIINCDDTLRELFGVDTIGMFEMNKALTKHIWPLDSDGVSTITNSGSVNSTANKKR
RKQEEDEDSDEPKKEEKQKNSGMHAPLRLSNALINFLGTGESELSRPNVVKRIWEYIKQN
GLQDPSDERQIISDEKLKELFHVETHRGIGVTKLLSTHFIKAEG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggacaacgagctcgtcgaccggctgcgtgagtttctaagcacgtcagacctc
aacatcaccaccaacagtgacgtccggcgaaagctcgaaaaggacttcaatatcgattta
tcggatagaaaagtgttcattcgagagcaaattgatctttaccttgaaagccactatcaa
gttaaccaagaaaatgagaataatgaggaagaaatggaagaagaaaacgatcaaggaccg
tcagcggaagttaaatcggaagtgagtgaagaggaagaagacccggaggaggaggaagaa
gaagaagacccggaggaggaagaagaagaggaatctgaggctgttgctaaagtaaaacga
agaagttctaagaaaaatcctgcgaagaagaatgaaactggtaaaaggaaagctggtgga
tttaccaaactatgcagcctttctccgcaacttcagaaaattactggggtagctgaactg
gcaaggacagaggtggtgaagaggatgtggcactatataaatgaaaatgatttgaaaaat
ccatcagataagcggattataaactgtgatgacacattgcgtgagctttttggtgtggat
accataggcatgttcgaaatgaacaaggccctgacaaagcatatctggcctttggattct
gatggtgtttctacaataacaaattctggttcagtaaattctacagcaaacaaaaagcgg
cggaagcaagaggaggatgaagattcagatgagccaaagaaagaggaaaagcagaagaac
tctggtatgcatgctccactccggctttctaatgccttgattaatttccttggtactgga
gagagtgaattgtctcgacccaatgttgttaaaagaatttgggaatacattaagcaaaat
ggcttacaggatccatctgacgagaggcaaataataagtgatgagaagttgaaagaactg
tttcatgttgaaacccacaggggaattggagtaacgaaactactttctacacattttatt
aaggcagaagggtga
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