Solanum stenotomum: 125848376
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Entry
125848376 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125848376
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125848376
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125848376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
125848376
NCBI-ProteinID:
XP_049384186
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All DBs
Position
12:49577912..49582283
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AA seq
485 aa
AA seq
DB search
MGGKSSREDSWRQASSTRSSSWNQYDYPQTAYPQDSYSYSQQAAVPSYAPPPPSQQNYPP
PQPQHNYASHEHESLPHAHAPRPRLDRRYSRIADNYNSLDEVTEALARAGLESSNLIVGI
DFTKSNEWTGKRSFGNRSLHHIGQNLNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTH
DQDVFNFFPDERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIEMAMTIVEQSGGQYHVL
LIIADGQVTRSVDTGRGQLSPQEQKTVDAIVQASKFPLSIILVGVGDGPWDMMKEFDDNI
PARDFDNFQFVNFTEIMAKNVPQSRKETEFALSALMEIPSQYKATMELNLLGGQSGKSPN
RVALPPPMYGASSVGGSKTSRPPSFQQPASSYYGYGSPAEAAPHFQPTSSSYYDSARPVD
TAPSAPSSPYTAPSSTYDNQVCPICLTNPKDMAFGCGHQTCCECGRALENCPICRSSIQT
RIKLY
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaagagttcaagagaggatagttggaggcaagcttcgtcgactcgatcttct
tcttggaatcaatacgattatcctcaaactgcttatcctcaagatagttacagttactca
cagcaggcggctgttccttcttatgcgccaccaccaccatcccaacagaattatcctcct
ccacagccccaacacaattatgcttctcatgaacatgaatctctgcctcatgctcatgct
ccacgaccaaggcttgaccggagatactcgaggattgcagacaattataattccctggat
gaggtgactgaagcccttgcacgagctggcttggagtcttcgaatctaattgtgggtatt
gatttcaccaagagcaatgaatggacaggtaagaggtcttttggtaatcggagcctacat
cacattgggcagaatttgaacccatatgagcaagccatttccataattggaaaaacctta
gcggcatttgatgaggataacttgattccttgttttggattcggagatgcatcaactcat
gatcaagatgtattcaatttctttcccgatgaaagattttgtaatggttttgaggaagtt
ctgtcacgttacagagaaattgtcccccagctgaagcttgcaggaccaacatcattcgcc
ccggtcattgaaatggccatgacaatagttgaacagagtggaggccagtaccatgttcta
ttaatcattgcagatgggcaggtaactagaagtgttgatactggccgtggacaattaagt
ccgcaggagcagaaaacggtggatgcaatcgtacaagcaagcaagtttcccttgtcaatt
atactggttggggttggcgatgggccctgggatatgatgaaggaatttgatgataatatt
cctgctagggacttcgataatttccagttcgtcaatttcacggagataatggccaaaaat
gtgcctcaatctcgaaaggagacggagtttgcgctttcagcattgatggaaattccttca
caatacaaagcgacgatggaacttaacttactgggtggacaaagtggaaaatctcccaat
agggtagctcttcctcctcctatgtatggagcaagttctgtcggtggctcaaagacctca
cgtccaccgagttttcagcagcctgcaagctcgtattacggttatggaagccctgccgaa
gcagcaccacattttcagccgacttcaagttcttattatgacagtgctcgcccagttgac
actgctccatctgctccaagttctccctacactgctcccagttctacatatgacaatcag
gtttgccccatttgtcttactaacccaaaagacatggcctttggctgtgggcatcagaca
tgttgcgagtgtgggagagcgcttgagaattgcccaatatgtcgaagttcaattcaaacc
agaataaagctctattga
DBGET
integrated database retrieval system
